RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 GABRA5P31644 462 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 CFAP77Q6ZQR2 320 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 OR11H4Q8NGC9 324 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 CNRIP1Q96F85 164 aaPredicted RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 TMEM43Q9BTV4 400 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 KLK11Q9UBX7 282 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 TCRBP04435 133 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 POLR2CP19387 275 aaPredicted RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 TRMT12Q53H54 448 aaKnown RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF793Q6ZN11 406 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 HDDC3Q8N4P3 179 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 WFIKKN2Q8TEU8 576 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 RASSF5Q8WWW0 418 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 DVL3Q92997 716 aaPredicted RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 POP5Q969H6 163 aaKnown RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 POLDIP3Q9BY77 421 aaKnown RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 RNF32Q9H0A6 362 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 EXOSC1Q9Y3B2 195 aaKnown RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 DENND4AQ7Z401 1863 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 CDHR4A6H8M9 788 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 CACNB4O00305 520 aaPredicted RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 GABRA3P34903 492 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 BNC1Q01954 994 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 DHCR24Q15392 516 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 SF3A2Q15428 464 aaKnown RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 GLYR1Q49A26 553 aaPredicted RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 VITQ6UXI7 678 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 NUDT18Q6ZVK8 323 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 FAM219AQ8IW50 185 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 RFLNBQ8N5W9 214 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 GNPDA2Q8TDQ7 276 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 LRIG1Q96JA1 1093 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 ULBP3Q9BZM4 244 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 ADAM18Q9Y3Q7 739 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 SDK2Q58EX2 2172 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 KLHL18O94889 574 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 RECKO95980 971 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 CFDP00746 253 aaPredicted RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 HOXB9P17482 250 aaPredicted RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 RAB3BP20337 219 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 RPS5P46782 204 aaKnown RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 PSMA6P60900 246 aaKnown RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF155Q12901 538 aaPredicted RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 SFRP5Q5T4F7 317 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 SFXN4Q6P4A7 337 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 FCRLAQ7L513 359 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 OR5J2Q8NH18 312 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 TAPBPLQ9BX59 468 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 GON7Q9BXV9 100 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 UBQLN3Q9H347 655 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 FARSAQ9Y285 508 aaKnown RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 OR10H1Q9Y4A9 318 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 A0A1B0GTH9 108 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 RNF13O43567 381 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 UGDHO60701 494 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 DNAJB6O75190 326 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 TFP02787 698 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 IFNA16P05015 189 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 CPEP16870 476 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 RAB40BQ12829 278 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 TDGQ13569 410 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 EXOSC2Q13868 293 aaKnown RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 C4orf46Q504U0 113 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 RELL2Q8NC24 303 aaPredicted RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 WDR89Q96FK6 387 aaPredicted RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 TNFRSF13CQ96RJ3 184 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 SLC25A19Q9HC21 320 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 MBNL1Q9NR56 388 aaKnown RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 BABAM2Q9NXR7 383 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 A3GALT2U3KPV4 340 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 TCRBV16S1A1N1A0A5B0 115 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 GREM1O60565 184 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 MRPS14O60783 128 aaKnown RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 RGS9O75916 674 aaPredicted RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 SLC22A5O76082 557 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 SNRPGP62308 76 aaKnown RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 MELKQ14680 651 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 GRK1Q15835 563 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 LIN54Q6MZP7 749 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 ZBTB44Q8NCP5 570 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 LGALS14Q8TCE9 139 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 DTD2Q96FN9 168 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 PRRC1Q96M27 445 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 INSM2Q96T92 566 aaPredicted RBP13.55□□□□□ -0.24
PTPN9-201ENST00000306726 CCDC3Q9BQI4 270 aa13.55□□□□□ -0.24
PTPN9-201ENST00000306726 RGS13O14921 159 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 SOD1P00441 154 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 HPXP02790 462 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ACADMP11310 421 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ADRB3P13945 408 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 ACADLP28330 430 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 LTBRP36941 435 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 PCBP3P57721 371 aaKnown RBP13.54□□□□□ -0.24
PTPN9-201ENST00000306726 HSF2Q03933 536 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 PGGHGQ32M88 737 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 SCGB2B2Q4G0G5 96 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 FAM78AQ5JUQ0 283 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 FBXL6Q8N531 539 aa13.54□□□□□ -0.24
PTPN9-201ENST00000306726 OR11H7Q8NGC8 314 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms