RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 E9PQ18 207 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 SCO2O43819 266 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 RBM34P42696 430 aaKnown RBP16.04■□□□□ 0.16
KRT28-201ENST00000306658 OMPP47874 163 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 IDH2P48735 452 aaKnown RBP16.04■□□□□ 0.16
KRT28-201ENST00000306658 LSM11P83369 360 aaKnown RBP eCLIP16.04■□□□□ 0.16
KRT28-201ENST00000306658 ZNF117Q03924 483 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 TSPAN31Q12999 210 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 NTRK2Q16620 822 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 OPN5Q6U736 354 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 LYPD8Q6UX82 237 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 MRGPREQ86SM8 312 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 RPS19BP1Q86WX3 136 aaKnown RBP16.04■□□□□ 0.16
KRT28-201ENST00000306658 CDK20Q8IZL9 346 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 ZNF786Q8N393 782 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 SPACA9Q96E40 222 aaPredicted RBP16.04■□□□□ 0.16
KRT28-201ENST00000306658 IP6K3Q96PC2 410 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 NODALQ96S42 347 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 CCNL2Q96S94 520 aaPredicted RBP16.04■□□□□ 0.16
KRT28-201ENST00000306658 RTN4RQ9BZR6 473 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 CDV3Q9UKY7 258 aaKnown RBP16.04■□□□□ 0.16
KRT28-201ENST00000306658 MED31Q9Y3C7 131 aa16.04■□□□□ 0.16
KRT28-201ENST00000306658 PTPRBP23467 1997 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 EXPH5Q8NEV8 1989 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 CEP250Q9BV73 2442 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 H3BN98 237 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 TP53I11O14683 189 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 OIP5O43482 229 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 CHMP24386 653 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 FPR3P25089 353 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 GSSP48637 474 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 ISL1P61371 349 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 IL5RAQ01344 420 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 ALDH6A1Q02252 535 aaKnown RBP16.03■□□□□ 0.16
KRT28-201ENST00000306658 C17orf67Q0P5P2 114 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 IL10RAQ13651 578 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 PTGES3Q15185 160 aaKnown RBP16.03■□□□□ 0.16
KRT28-201ENST00000306658 WDR88Q6ZMY6 472 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 DTX1Q86Y01 620 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 DND1Q8IYX4 353 aaKnown RBP16.03■□□□□ 0.16
KRT28-201ENST00000306658 ARMC10Q8N2F6 343 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 ZNF563Q8TA94 476 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 KIAA1143Q96AT1 154 aaPredicted RBP16.03■□□□□ 0.16
KRT28-201ENST00000306658 SH3YL1Q96HL8 342 aaPredicted RBP16.03■□□□□ 0.16
KRT28-201ENST00000306658 FAM46AQ96IP4 442 aaKnown RBP16.03■□□□□ 0.16
KRT28-201ENST00000306658 YTHDF1Q9BYJ9 559 aaKnown RBP16.03■□□□□ 0.16
KRT28-201ENST00000306658 CDCP1Q9H5V8 836 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 ZNF696Q9H7X3 374 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 TMEM5Q9Y2B1 443 aa16.03■□□□□ 0.16
KRT28-201ENST00000306658 EIF4E1BA6NMX2 242 aaKnown RBP16.02■□□□□ 0.16
KRT28-201ENST00000306658 SERPINA7P05543 415 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 PGCP20142 388 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 ITPKBP27987 946 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 POU1F1P28069 291 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 GGT2P36268 569 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 SSR4P51571 173 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 P2RX1P51575 399 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 NUP107P57740 925 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 CHAF1BQ13112 559 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 CBFBQ13951 182 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 LINC00114Q6XXX2 140 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 OR5W2Q8NH69 310 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 DUSP19Q8WTR2 217 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 GPA33Q99795 319 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 ZNF426Q9BUY5 554 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 GPN2Q9H9Y4 310 aaPredicted RBP16.02■□□□□ 0.16
KRT28-201ENST00000306658 HHATLQ9HCP6 504 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 ASCL3Q9NQ33 180 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 SDHAF3Q9NRP4 125 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 DLL3Q9NYJ7 618 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 CNIH4Q9P003 139 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 ICAM5Q9UMF0 924 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 CFAP54Q96N23 3096 aa16.02■□□□□ 0.16
KRT28-201ENST00000306658 DMXL1Q9Y485 3027 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 OR6B1O95007 311 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 NTN1O95631 604 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 NUDT14O95848 222 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 PNMTP11086 282 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 SOX3P41225 446 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 SLC1A3P43003 542 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 MLF1P58340 268 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 PRKCDQ05655 676 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 ZNF791Q3KP31 576 aaPredicted RBP16.02■□□□□ 0.15
KRT28-201ENST00000306658 TMEM154Q6P9G4 183 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 DEPDC4Q8N2C3 294 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 B4GALNT2Q8NHY0 566 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 RNF138Q8WVD3 245 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 ASB15Q8WXK1 588 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 C3orf49Q96BT1 292 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 METTL7AQ9H8H3 244 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 KLRF1Q9NZS2 232 aa16.02■□□□□ 0.15
KRT28-201ENST00000306658 MRPS18BQ9Y676 258 aaKnown RBP16.02■□□□□ 0.15
KRT28-201ENST00000306658 A0A087WUJ7 227 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 ZAR1LA6NP61 321 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 DLL1O00548 723 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 PIP5K1CO60331 668 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 SOX14O95416 240 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 IFI30P13284 250 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 CDC42P60953 191 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 CD47Q08722 323 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms