RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 FUNDC2Q9BWH2 189 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 FLRT3Q9NZU0 649 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 GPR52Q9Y2T5 361 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 IGLV3-12A0A075B6K2 115 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 C9J4A7 227 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 NTN3O00634 580 aaPredicted RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 ZNF264O43296 627 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 HMGN1P05114 100 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 LCKP06239 509 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 MASP1P48740 699 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 CRYZQ08257 329 aaKnown RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 KLHL26Q53HC5 615 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 WDR36Q8NI36 951 aaKnown RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 OMA1Q96E52 524 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 H3BMQ9 156 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 ZNF883P0CG24 379 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 FGF5P12034 268 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 NR4A1P22736 598 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 GP2P55259 537 aaKnown RBP13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 PRKCDQ05655 676 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 GTF2IRD2BQ6EKJ0 949 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 KIRREL2Q6UWL6 708 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 BCDIN3DQ7Z5W3 292 aaKnown RBP13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 GTF2IRD2Q86UP8 949 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 LSMEM1Q8N8F7 131 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 OR8D4Q8NGM9 314 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 C9orf43Q8TAL5 461 aaPredicted RBP13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 COG8Q96MW5 612 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 CMKLR1Q99788 373 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 ULBP3Q9BZM4 244 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 OR52D1Q9H346 318 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 ZBTB20Q9HC78 741 aaPredicted RBP13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 C20orf141Q9NUB4 165 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 SLC39A1Q9NY26 324 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 IL20Q9NYY1 176 aa13.33□□□□□ -0.27
SHCBP1-201ENST00000303383 ELOA3DA6NLF2 546 aaPredicted RBP13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 CDC42EP2O14613 210 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 HCRTR2O43614 444 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 NDUFB5O43674 189 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 ICOSLGO75144 302 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 TBCEQ15813 527 aaPredicted RBP13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 ELOA3BQ3SY89 546 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 RPL13AP3Q6NVV1 102 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 SMARCD3Q6STE5 483 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 OAFQ86UD1 273 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 C10orf53Q8N6V4 93 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 ELOA3Q8NG57 546 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 OR51A7Q8NH64 312 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 TMEM163Q8TC26 289 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 IFT27Q9BW83 186 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 ERGIC3Q9Y282 383 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 LNP1A1A4G5 178 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 AHCYL1O43865 530 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 GP1BAP07359 652 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 CCL4P13236 92 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 ATP6V1E1P36543 226 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 RBM34P42696 430 aaKnown RBP13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 MED22Q15528 200 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 OCLNQ16625 522 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 PGGHGQ32M88 737 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 PLAG1Q6DJT9 500 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 FAM26EQ8N5C1 309 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 RXFP3Q9NSD7 469 aa13.33□□□□□ -0.28
SHCBP1-201ENST00000303383 SAGE2PA6NJ88 616 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 HCN1O60741 890 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 MAKP20794 623 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 TBXA2RP21731 343 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 NOS3P29474 1203 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 RNF4P78317 190 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 PLAURQ03405 335 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 ZNF91Q05481 1191 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 OIT3Q8WWZ8 545 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 NACC2Q96BF6 587 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 NUP210LQ5VU65 1888 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 GDF9O60383 454 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 FUT1P19526 365 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 ABCD3P28288 659 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 PCSK6P29122 969 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 TIGD6Q17RP2 521 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 SYT6Q5T7P8 510 aaPredicted RBP13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 WBP2NLQ6ICG8 309 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 P2RY8Q86VZ1 359 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 OR5M3Q8NGP4 307 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 OR13C2Q8NGS9 318 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 RFKQ969G6 155 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 VMP1Q96GC9 406 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 CRELD1Q96HD1 420 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 TMEM80Q96HE8 168 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 DEPDC7Q96QD5 511 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 ADAMTS20P59510 1910 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 FAM86C2PA6NEL3 165 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 ADAM11O75078 769 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 LCN1P31025 176 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 CD226Q15762 336 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 SYT14P1Q58G82 188 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 TMEM201Q5SNT2 666 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 CPEB2Q7Z5Q1 589 aaKnown RBP13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 ALDH16A1Q8IZ83 802 aa13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 NXT1Q9UKK6 140 aaKnown RBP13.32□□□□□ -0.28
SHCBP1-201ENST00000303383 PCDHGB2Q9Y5G2 931 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms