RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 RPL35P42766 123 aaKnown RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 KHKP50053 298 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ST3GAL3Q11203 375 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 TAF12Q16514 161 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 C2orf68Q2NKX9 166 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 PRAMEF14Q5SWL7 426 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 PRAMEF13Q5VWM6 474 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF660Q6AZW8 331 aaPredicted RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 APOOLQ6UXV4 268 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 MEPCEQ7L2J0 689 aaKnown RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 SSX6Q7RTT6 188 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 GID4Q8IVV7 300 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 RFLNBQ8N5W9 214 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 MEIOBQ8N635 442 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ZDHHC1Q8WTX9 485 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF296Q8WUU4 475 aaPredicted RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ACOT11Q8WXI4 607 aaPredicted RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 KAT2AQ92830 837 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 GHSRQ92847 366 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 GLYATL1Q969I3 302 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 C16orf58Q96GQ5 468 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 PPP1R16AQ96I34 528 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 TEX12Q9BXU0 123 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 CPEB1Q9BZB8 566 aaKnown RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 IFT22Q9H7X7 185 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 NOX3Q9HBY0 568 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ABRACLQ9P1F3 81 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 AK6Q9Y3D8 172 aaKnown RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 USP34Q70CQ2 3546 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 DENND4AQ7Z401 1863 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 CDHR4A6H8M9 788 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 D6RAR5 112 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ABCD4O14678 606 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 HMGN2P05204 90 aaKnown RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 IL9P15248 144 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 PPP3CBP16298 524 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 GK2Q14410 553 aaPredicted RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF311Q5JNZ3 666 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ELFN2Q5R3F8 820 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 DMKNQ6E0U4 476 aaPredicted RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 CFAP206Q8IYR0 622 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 SLC44A3Q8N4M1 653 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 PCSK9Q8NBP7 692 aaKnown RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 OR5M9Q8NGP3 310 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 LRRC46Q96FV0 321 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 CAMK1GQ96NX5 476 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 CASD1Q96PB1 797 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 FERD3LQ96RJ6 166 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 SLC38A1Q9H2H9 487 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 SLC6A20Q9NP91 592 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 STARD7Q9NQZ5 370 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 ACSS1Q9NUB1 689 aaPredicted RBP10.1□□□□□ -0.79
ZNF558-201ENST00000301475 AHSPQ9NZD4 102 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 HS3ST2Q9Y278 367 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 YIPF1Q9Y548 306 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 C5orf42Q9H799 3197 aa10.1□□□□□ -0.79
ZNF558-201ENST00000301475 FXYD6-FXYD2A0A087WZ82 144 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 FEZF1A0PJY2 475 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 GLOD5A6NK44 160 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 HIST1H2ABP04908 130 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 ATP1B1P05026 303 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 CD53P19397 219 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 MST1P26927 711 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 H2BFSP57053 126 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF85Q03923 595 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 CAMK1Q14012 370 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 GPNMBQ14956 572 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 CSRP2Q16527 193 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 MAPK14Q16539 360 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 PRPF38BQ5VTL8 546 aaKnown RBP10.09□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF626Q68DY1 528 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 GSG1LQ6UXU4 331 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 HIST3H2AQ7L7L0 130 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 TRMT11Q7Z4G4 463 aaKnown RBP10.09□□□□□ -0.79
ZNF558-201ENST00000301475 UBE2Q1Q7Z7E8 422 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 NAXDQ8IW45 347 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 PDZD9Q8IXQ8 264 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 RELL2Q8NC24 303 aaPredicted RBP10.09□□□□□ -0.79
ZNF558-201ENST00000301475 OR5M1Q8NGP8 315 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
ZNF558-201ENST00000301475 HERVK_113Q902F9 699 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 HIST1H2ACQ93077 130 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 ELP4Q96EB1 424 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 HHIPL1Q96JK4 782 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 ZCCHC2Q9C0B9 1178 aaKnown RBP10.09□□□□□ -0.79
ZNF558-201ENST00000301475 FXYD6Q9H0Q3 95 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 OPN4Q9UHM6 478 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 OBSL1O75147 1896 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 A0A1W2PS29 197 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 MAGEB4O15481 346 aaPredicted RBP10.09□□□□□ -0.79
ZNF558-201ENST00000301475 FLRT2O43155 660 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 CREBL2O60519 120 aaPredicted RBP10.09□□□□□ -0.79
ZNF558-201ENST00000301475 PCDH8O95206 1070 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
ZNF558-201ENST00000301475 POP4O95707 220 aaKnown RBP10.09□□□□□ -0.79
ZNF558-201ENST00000301475 HPP00738 406 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 RLN2P04090 185 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 HMGN1P05114 100 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 ASGR2P07307 311 aa10.09□□□□□ -0.79
ZNF558-201ENST00000301475 CLUP10909 449 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms