RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 FBXW10Q5XX13 1052 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 OR5M10Q6IEU7 315 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 REEP3Q6NUK4 255 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 SLC30A6Q6NXT4 461 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 RPUSD3Q6P087 351 aaKnown RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 CBLN3Q6UW01 205 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 ZNF836Q6ZNA1 936 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 CCDC80Q76M96 950 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 FGD2Q7Z6J4 655 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 TSPYL5Q86VY4 417 aaPredicted RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 SPPL2CQ8IUH8 684 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 MICU2Q8IYU8 434 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 DEFB107AQ8IZN7 70 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 CLIP4Q8N3C7 705 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 ZNF843Q8N446 348 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 CISD2Q8N5K1 135 aaKnown RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 TMEM251Q8N6I4 163 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 RNF148Q8N7C7 305 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 LSM14AQ8ND56 463 aaKnown RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 FAM156AQ8NDB6 213 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 OR2M3Q8NG83 312 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 GPR32P1Q8NGA4 272 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 TM9SF4Q92544 642 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 CNOT9Q92600 299 aaKnown RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 TAMM41Q96BW9 452 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 ANAPC16Q96DE5 110 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 SNRNP40Q96DI7 357 aaKnown RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 REXO5Q96IC2 774 aaKnown RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 CLPTM1LQ96KA5 538 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 C5orf34Q96MH7 638 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 GNRHR2Q96P88 292 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 CDRT15Q96T59 188 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 HOPXQ9BPY8 73 aaPredicted RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 FAM173AQ9BQD7 235 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 G6PC3Q9BUM1 346 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 ZNF703Q9H7S9 590 aaPredicted RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 METTL7AQ9H8H3 244 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 ZDHHC11Q9H8X9 412 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 POLE3Q9NRF9 147 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 UBQLN4Q9NRR5 601 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 RLIMQ9NVW2 624 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 KLRF1Q9NZS2 232 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 CNIH4Q9P003 139 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 MED11Q9P086 117 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 CORO2BQ9UQ03 480 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 LIPT1Q9Y234 373 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 KLF13Q9Y2Y9 288 aaPredicted RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 PCDHGB3Q9Y5G1 929 aa5.36□□□□□ -1.55
SSX3-201ENST00000298396 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.36□□□□□ -1.55
SSX3-201ENST00000298396 GCN1Q92616 2671 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 LRRK2Q5S007 2527 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 SPTAN1Q13813 2472 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 DOPEY2Q9Y3R5 2298 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 HCFC1P51610 2035 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 C15orf38-AP3S2A0A0A6YYH1 394 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 A0A0G2JPF8 293 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 SERINC4A6NH21 518 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 HNRNPCL2B2RXH8 293 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 HNRNPCL3B7ZW38 293 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 AP3D1O14617 1153 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 SUV39H1O43463 412 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 FRS3O43559 492 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ZIC3O60481 467 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 TPST2O60704 377 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 HNRNPCL1O60812 293 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 PDE5AO76074 875 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 MFN2O95140 757 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 OPN1SWP03999 348 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 PABPC4LP0CB38 370 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 HNRNPCL4P0DMR1 293 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 SFTPCP11686 197 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 PRG2P13727 222 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 HSD17B1P14061 328 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ETS2P15036 469 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 NCK1P16333 377 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ENDOUP21128 410 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 ATP6V1C1P21283 382 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 MSX2P35548 267 aaPredicted RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 KRT20P35900 424 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ACAA2P42765 397 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 MAGEA5P43359 124 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ZNF136P52737 540 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 CRISP3P54108 245 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 PSMD4P55036 377 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 MLLT10P55197 1068 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 B3GALT5-AS1P59052 145 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 KCNJ2P63252 427 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 RBBP4Q09028 425 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 TOMM34Q15785 309 aaPredicted RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 NPTX1Q15818 432 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 INAQ16352 499 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 TMEM44Q2T9K0 475 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 EIPR1Q53HC9 387 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 DCST1Q5T197 706 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 MRPL2Q5T653 305 aaKnown RBP5.35□□□□□ -1.55
SSX3-201ENST00000298396 RNF220Q5VTB9 566 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 TIGD3Q6B0B8 471 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 ARSKQ6UWY0 536 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 TRILQ7L0X0 811 aa5.35□□□□□ -1.55
SSX3-201ENST00000298396 TSEN54Q7Z6J9 526 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms