RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 POMZP3Q6PJE2 187 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ZNF554Q86TJ5 538 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ZNF527Q8NB42 609 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 POGLUT1Q8NBL1 392 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 OR8J1Q8NGP2 316 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 FAR1Q8WVX9 515 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 TMEM239Q8WW34 195 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 GGHQ92820 318 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ARSGQ96EG1 525 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 TRIM2Q9C040 744 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 UBQLN4Q9NRR5 601 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 SLC35A3Q9Y2D2 325 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 PCDHGB2Q9Y5G2 931 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 OR6C76A6NM76 312 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ZNF99A8MXY4 864 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ADAM11O75078 769 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 FADS2O95864 444 aaKnown RBP13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ONECUT2O95948 504 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 HEXBP07686 556 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 RAC2P15153 192 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 PTNP21246 168 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 MAP2K4P45985 399 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 FOXL2P58012 376 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ZFP36L1Q07352 338 aaKnown RBP13.12□□□□□ -0.31
C9orf3-202ENST00000297979 IL11RAQ14626 422 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 KLHL26Q53HC5 615 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 CEP78Q5JTW2 689 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 TMEM201Q5SNT2 666 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 SLC29A4Q7RTT9 530 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 OVCH1Q7RTY7 1134 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 BMP8AQ7Z5Y6 402 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ALDH16A1Q8IZ83 802 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 OR8H2Q8N162 312 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 GRHL3Q8TE85 626 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 Q96MT0 163 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 TVP23BQ9NYZ1 205 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 FLRT3Q9NZU0 649 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 A0A1B0GWA3 101 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 IDSB3KWA1 339 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 CHP2O43745 196 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 GP1BAP07359 652 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 SLC5A2P31639 672 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 TMEM95Q3KNT9 176 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 SLC27A4Q6P1M0 643 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 CCDC81Q6ZN84 652 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 LSMEM1Q8N8F7 131 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 AGBL5Q8NDL9 886 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 OR8D4Q8NGM9 314 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 RORBQ92753 470 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ATOH1Q92858 354 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-202ENST00000297979 CTRCQ99895 268 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 POLDIP3Q9BY77 421 aaKnown RBP13.12□□□□□ -0.31
C9orf3-202ENST00000297979 WWTR1Q9GZV5 400 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 GPR83Q9NYM4 423 aa13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ZNF223Q9UK11 482 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-202ENST00000297979 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
C9orf3-202ENST00000297979 CDK1P06493 297 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 HPGDP15428 266 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 PCYT1AP49585 367 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 ACSM5Q6NUN0 579 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 TCEANCQ8N8B7 351 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 ACOT13Q9NPJ3 140 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 CPNE3O75131 537 aaKnown RBP13.11□□□□□ -0.31
C9orf3-202ENST00000297979 UTS2O95399 124 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 ACP1P24666 158 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 GP2P55259 537 aaKnown RBP13.11□□□□□ -0.31
C9orf3-202ENST00000297979 NDUFAF6Q330K2 333 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 ZNF620Q6ZNG0 422 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 ANKRD37Q7Z713 158 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 ZNF440Q8IYI8 595 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 BMPERQ8N8U9 685 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 B3GNT7Q8NFL0 401 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 PFN4Q8NHR9 129 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 OSTF1Q92882 214 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 HS6ST2Q96MM7 605 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 DOK1Q99704 481 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 TBC1D23Q9NUY8 699 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 CNOT2Q9NZN8 540 aaKnown RBP13.11□□□□□ -0.31
C9orf3-202ENST00000297979 MED31Q9Y3C7 131 aa13.11□□□□□ -0.31
C9orf3-202ENST00000297979 MYO15AQ9UKN7 3530 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 VSTM2BA6NLU5 285 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 SCDO00767 359 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 TO15178 435 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 FLRT2O43155 660 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 NOL3O60936 208 aaKnown RBP13.1□□□□□ -0.31
C9orf3-202ENST00000297979 ALOX12BO75342 701 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 ENTPD6O75354 484 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 LCN1P31025 176 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 NR0B1P51843 470 aaKnown RBP13.1□□□□□ -0.31
C9orf3-202ENST00000297979 PRKCDQ05655 676 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 ALG10BQ5I7T1 473 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 STX19Q8N4C7 294 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 CLDN22Q8N7P3 220 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 WDR36Q8NI36 951 aaKnown RBP13.1□□□□□ -0.31
C9orf3-202ENST00000297979 SLC22A8Q8TCC7 542 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 C12orf43Q96C57 262 aaKnown RBP13.1□□□□□ -0.31
C9orf3-202ENST00000297979 PRRG3Q9BZD7 231 aa13.1□□□□□ -0.31
C9orf3-202ENST00000297979 NRSN2Q9GZP1 204 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms