RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 IDH2P48735 452 aaKnown RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 E2F1Q01094 437 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 TSPAN31Q12999 210 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 BROXQ5VW32 411 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 ZNF517Q6ZMY9 492 aaPredicted RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 RRM2BQ7LG56 351 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 ZNF527Q8NB42 609 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 APCDD1LQ8NCL9 501 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 FAM71CQ8NEG0 241 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 SUN5Q8TC36 379 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 COG8Q96MW5 612 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 MESP1Q9BRJ9 268 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 MROQ9BYG7 248 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 NRSN2Q9GZP1 204 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 FLRT3Q9NZU0 649 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 CRNNQ9UBG3 495 aaPredicted RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 DAPK2Q9UIK4 370 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 CACNA1HO95180 2353 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 RGS13O14921 159 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 TSPAN2O60636 221 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 ABCB7O75027 752 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 CSTAP01040 98 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 IGFBP1P08833 259 aaPredicted RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 TBXA2RP21731 343 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 EEF1B2P24534 225 aaKnown RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 FPR3P25089 353 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 POU1F1P28069 291 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 NR0B1P51843 470 aaKnown RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 CDC42P60953 191 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 CSNK2BP67870 215 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 SELENBP1Q13228 472 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 TMEM236Q5W0B7 351 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 FAM198BQ6UWH4 519 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 WDR88Q6ZMY6 472 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 CPEB2Q7Z5Q1 589 aaKnown RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 NRMQ8IXM6 262 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 RNF113BQ8IZP6 322 aaKnown RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 SLC34A3Q8N130 599 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 TP53INP1Q96A56 240 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 ULBP3Q9BZM4 244 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 DUSP21Q9H596 190 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 PAK1IP1Q9NWT1 392 aaPredicted RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 XPNPEP2O43895 674 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 HTR1AP08908 422 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 KRT20P35900 424 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 RNF4P78317 190 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 INSM1Q01101 510 aaPredicted RBP14.28□□□□□ -0.12
LSM6-201ENST00000296581 SPCS2Q15005 226 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 CDCP2Q5VXM1 449 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 C12orf73Q69YU5 71 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 PAPD4Q6PIY7 484 aaKnown RBP14.28□□□□□ -0.12
LSM6-201ENST00000296581 ZNF440Q8IYI8 595 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 POGLUT1Q8NBL1 392 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 SGCDQ92629 289 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 FAM46AQ96IP4 442 aaKnown RBP14.28□□□□□ -0.12
LSM6-201ENST00000296581 DOK1Q99704 481 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 CDC6Q99741 560 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 C19orf25Q9UFG5 118 aaPredicted RBP14.28□□□□□ -0.12
LSM6-201ENST00000296581 TPRKBQ9Y3C4 175 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 LOXL2Q9Y4K0 774 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 A0A0C4DFX4 3053 aa14.28□□□□□ -0.12
LSM6-201ENST00000296581 A0A1B0GWA3 101 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 CDC14CA4D256 554 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 H3BN98 237 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 CHP2O43745 196 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 MPZL2O60487 215 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 RFPL3O75679 317 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 PRKACBP22694 351 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 NR4A1P22736 598 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 SLC35A2P78381 396 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 SPEM2Q0P670 501 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 SMN1Q16637 294 aaKnown RBP14.27□□□□□ -0.12
LSM6-201ENST00000296581 AGAP7PQ5VUJ5 663 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 RASSF6Q6ZTQ3 369 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 IGFN1Q86VF2 1251 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 KIF18BQ86Y91 864 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 CCDC103Q8IW40 242 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 PRR22Q8IZ63 422 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 ZNF420Q8TAQ5 688 aaPredicted RBP14.27□□□□□ -0.12
LSM6-201ENST00000296581 VMP1Q96GC9 406 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 ADOQ96SZ5 270 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 LPAR4Q99677 370 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 STRADBQ9C0K7 418 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 KRCC1Q9NPI7 259 aaPredicted RBP14.27□□□□□ -0.12
LSM6-201ENST00000296581 PLCXD1Q9NUJ7 323 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 IMPAD1Q9NX62 359 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 SCN3BQ9NY72 215 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 GPN3Q9UHW5 284 aaPredicted RBP14.27□□□□□ -0.12
LSM6-201ENST00000296581 SPEGQ15772 3267 aa14.27□□□□□ -0.12
LSM6-201ENST00000296581 SCDO00767 359 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 PIP5K1CO60331 668 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 REM1O75628 298 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 NGFRP08138 427 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 ITIH1P19827 911 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 STAT5AP42229 794 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 PNLIPRP2P54317 469 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 PLCXD2Q0VAA5 305 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 CD226Q15762 336 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 NDUFAF6Q330K2 333 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 FAM199XQ6PEV8 388 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms