RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SLC30A6Q6NXT4 461 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 TSEN54Q7Z6J9 526 aaKnown RBP13.81□□□□□ -0.2
CCDC140-201ENST00000295226 RBMXL3Q8N7X1 1067 aaKnown RBP13.81□□□□□ -0.2
CCDC140-201ENST00000295226 RASSF5Q8WWW0 418 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 NTNG2Q96CW9 530 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 SLC47A1Q96FL8 570 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 CNBD2Q96M20 576 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 C5orf34Q96MH7 638 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 RNF145Q96MT1 663 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 ARHGDIGQ99819 225 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 CIB1Q99828 191 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 DSN1Q9H410 356 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 TUBA8Q9NY65 449 aaPredicted RBP13.81□□□□□ -0.2
CCDC140-201ENST00000295226 FBXL2Q9UKC9 423 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 SLC35A3Q9Y2D2 325 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 USP24Q9UPU5 2620 aa13.81□□□□□ -0.2
CCDC140-201ENST00000295226 SMIM31A0A1B0GVY4 71 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 NME2P1O60361 137 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 CDC40O60508 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC140-201ENST00000295226 DIRAS1O95057 198 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 RASAL1O95294 804 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 NME2P22392 152 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 ACAA2P42765 397 aaKnown RBP13.8□□□□□ -0.2
CCDC140-201ENST00000295226 MASP1P48740 699 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 ZNF136P52737 540 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 VLDLRP98155 873 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 C17orf67Q0P5P2 114 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 SNTA1Q13424 505 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 TOMM34Q15785 309 aaPredicted RBP13.8□□□□□ -0.2
CCDC140-201ENST00000295226 IFI44LQ53G44 452 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 EIPR1Q53HC9 387 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 C6orf52Q5T4I8 152 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 IGFL3Q6UXB1 125 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 ASB18Q6ZVZ8 466 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.8□□□□□ -0.2
CCDC140-201ENST00000295226 TSPYL5Q86VY4 417 aaPredicted RBP13.8□□□□□ -0.2
CCDC140-201ENST00000295226 EXD3Q8N9H8 876 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 OR2M7Q8NG81 312 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 MRPS26Q9BYN8 205 aaKnown RBP13.8□□□□□ -0.2
CCDC140-201ENST00000295226 ANKRD60Q9BZ19 345 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 AMBRA1Q9C0C7 1298 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 LAT2Q9GZY6 243 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 PNPLA3Q9NST1 481 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 LUZP4Q9P127 313 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 FREM3P0C091 2139 aa13.8□□□□□ -0.2
CCDC140-201ENST00000295226 NCKAP5O14513 1909 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 C7orf72A4D263 438 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 ANKRD33BA6NCL7 494 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 J3KTA2 159 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 SEMA7AO75326 666 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 TRIM3O75382 744 aaPredicted RBP13.79□□□□□ -0.2
CCDC140-201ENST00000295226 WISP1O95388 367 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 NUDT14O95848 222 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 SEMG1P04279 462 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 RFPL3SP0C7P2 107 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 FUT4P22083 530 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 SH3BGRP55822 239 aaPredicted RBP13.79□□□□□ -0.2
CCDC140-201ENST00000295226 RGS8P57771 180 aaPredicted RBP13.79□□□□□ -0.2
CCDC140-201ENST00000295226 PMP22Q01453 160 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 NHSL2Q5HYW2 709 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 TMEM81Q6P7N7 255 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 DEF8Q6ZN54 512 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 CMIPQ8IY22 773 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 FAM71CQ8NEG0 241 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 B4GALNT2Q8NHY0 566 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 SCMH1Q96GD3 660 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 C7orf34Q96L11 122 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 FRMD6Q96NE9 622 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 SLC29A1Q99808 456 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 CHID1Q9BWS9 393 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 ARMC7Q9H6L4 198 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 MAGIXQ9H6Y5 334 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 SDHAF3Q9NRP4 125 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 KLHL28Q9NXS3 571 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 UBAP1Q9NZ09 502 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 ICAM5Q9UMF0 924 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 PRRC2CQ9Y520 2896 aaKnown RBP13.79□□□□□ -0.2
CCDC140-201ENST00000295226 LRRC3CA6NJW4 275 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 SYT5O00445 386 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 SNX4O95219 450 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 HTR2AP28223 471 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 MEOX1P50221 254 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 FOXK1P85037 733 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 FOXO1Q12778 655 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 KRT80Q6KB66 452 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 ARSKQ6UWY0 536 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 GRAMD2AQ8IUY3 354 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 CBR4Q8N4T8 237 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 OR2M3Q8NG83 312 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 OR1J4Q8NGS1 313 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 GEMIN6Q8WXD5 167 aaKnown RBP13.79□□□□□ -0.2
CCDC140-201ENST00000295226 TM9SF4Q92544 642 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 TFAP2CQ92754 450 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 NPAS1Q99742 590 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 FAM173AQ9BQD7 235 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 RYDENQ9NUL5 291 aaKnown RBP13.79□□□□□ -0.2
CCDC140-201ENST00000295226 SLC9A8Q9Y2E8 581 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 KLF13Q9Y2Y9 288 aaPredicted RBP13.79□□□□□ -0.2
CCDC140-201ENST00000295226 BSNQ9UPA5 3926 aa13.79□□□□□ -0.2
CCDC140-201ENST00000295226 MED12Q93074 2177 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms