RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 GABRA2P47869 451 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 CNN3Q15417 329 aaKnown RBP16.19■□□□□ 0.18
SHANK1-201ENST00000293441 PGBD5Q8N414 524 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 PIGCQ92535 297 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 RAB9BQ9NP90 201 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 HS3ST2Q9Y278 367 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 RGPD1P0DJD0 1748 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 MRPL33O75394 65 aaKnown RBP16.18■□□□□ 0.18
SHANK1-201ENST00000293441 IGHG1P01857 330 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 DNASE1P24855 282 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 MZT1Q08AG7 82 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 LINC00696Q6ZRV3 163 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 ADAMTS16Q8TE57 1224 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 SLC30A3Q99726 388 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 ULBP2Q9BZM5 246 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 RGCCQ9H4X1 137 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 A0A1W2PQL4 384 aaPredicted RBP16.18■□□□□ 0.18
SHANK1-201ENST00000293441 ETV5P41161 510 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 TNFRSF17Q02223 184 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF616Q08AN1 781 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 PODNL1Q6PEZ8 512 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 ADIPOR2Q86V24 386 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 TXNDC15Q96J42 360 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 NR4A2P43354 598 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 BMXP51813 675 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 P2RY14Q15391 338 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 SHHQ15465 462 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 EGLN2Q96KS0 407 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 C4orf36Q96KX1 117 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 C1QTNF2Q9BXJ5 285 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 FAM155AB1AL88 458 aaPredicted RBP16.18■□□□□ 0.18
SHANK1-201ENST00000293441 G3V3Y1 287 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 J3KTA2 159 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 SUSD5O60279 629 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 SSR4P51571 173 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 TRUB1Q8WWH5 349 aaKnown RBP16.18■□□□□ 0.18
SHANK1-201ENST00000293441 CLMPQ9H6B4 373 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 IFNA1P01562 189 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 CAPNS1P04632 268 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 STT3AP46977 705 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 CCL11P51671 97 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 CDK5R2Q13319 367 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 OR5D14Q8NGL3 314 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 MUCL1Q96DR8 90 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 ARL6Q9H0F7 186 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 DHCR7Q9UBM7 475 aaKnown RBP16.18■□□□□ 0.18
SHANK1-201ENST00000293441 LSM5Q9Y4Y9 91 aaKnown RBP16.18■□□□□ 0.18
SHANK1-201ENST00000293441 GPR45Q9Y5Y3 372 aa16.18■□□□□ 0.18
SHANK1-201ENST00000293441 PIGBOS1A0A0B4J2F0 54 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 H3BNC9 293 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 SOCS7O14512 581 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 PARM1Q6UWI2 310 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 PHC2Q8IXK0 858 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 CMTM1Q8IZ96 169 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 LKAAEAR1Q8TD35 194 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 BTAF1O14981 1849 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 DCNP07585 359 aaKnown RBP16.17■□□□□ 0.18
SHANK1-201ENST00000293441 DRD5P21918 477 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 ADH6P28332 368 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 PRSS3P35030 304 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 MRPL2Q5T653 305 aaKnown RBP16.17■□□□□ 0.18
SHANK1-201ENST00000293441 HDAC8Q9BY41 377 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 TXLNGYQ9BZA5 131 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 THSD1Q9NS62 852 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 A0A1B0GTW7 788 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 C17orf113A0A1B0GUU1 675 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 SLC5A2P31639 672 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 CPOXP36551 454 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 CD93Q9NPY3 652 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 SHOXO15266 292 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 DENRO43583 198 aaKnown RBP16.17■□□□□ 0.18
SHANK1-201ENST00000293441 F13BP05160 661 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 BMP2P12643 396 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 DCAF7P61962 342 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 HBA1P69905 142 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 TMEM176BQ3YBM2 270 aaPredicted RBP16.17■□□□□ 0.18
SHANK1-201ENST00000293441 PKDCCQ504Y2 493 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 PAPD5Q8NDF8 572 aaKnown RBP16.17■□□□□ 0.18
SHANK1-201ENST00000293441 CHDHQ8NE62 594 aaPredicted RBP16.17■□□□□ 0.18
SHANK1-201ENST00000293441 IL17RDQ8NFM7 739 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 FBXO27Q8NI29 283 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 IL1F10Q8WWZ1 152 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 TNFSF12O43508 249 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 S100PP25815 95 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 CACNG6Q9BXT2 260 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 OR52D1Q9H346 318 aa16.17■□□□□ 0.18
SHANK1-201ENST00000293441 OR1D5P58170 312 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 GPR18Q14330 331 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 PROX2Q3B8N5 592 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 CNTN4Q8IWV2 1026 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 FAM183AA6NL82 134 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 EDN3P14138 238 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 SERPINA12Q8IW75 414 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF784Q8NCA9 323 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-201ENST00000293441 B3GNT7Q8NFL0 401 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 DUSP19Q8WTR2 217 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 ATOH8Q96SQ7 321 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF696Q9H7X3 374 aa16.16■□□□□ 0.18
SHANK1-201ENST00000293441 ARSBP15848 533 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms