RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HHLA2Q9UM44 414 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 SULT2B1O00204 365 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ZFAND5O76080 213 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 RAB3DO95716 219 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 RAB40ALP0C0E4 278 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 SLC2A5P22732 501 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF91Q05481 1191 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ILKQ13418 452 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 TUBB3Q13509 450 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 EXOSC7Q15024 291 aaKnown RBP11.97□□□□□ -0.49
PTCD1-201ENST00000292478 PPA1Q15181 289 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 RAB11FIP2Q7L804 512 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 OR51T1Q8NGJ9 327 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 RAB40AQ8WXH6 277 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 LMF1Q96S06 567 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ARHGAP9Q9BRR9 750 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 RBM24Q9BX46 236 aaKnown RBP11.97□□□□□ -0.49
PTCD1-201ENST00000292478 APMAPQ9HDC9 416 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 A0A0G2JMP0 313 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 LOC102725191A0A1B0GVB3 256 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ETV6P41212 452 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 GARNL3Q5VVW2 1013 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 CST9Q5W186 159 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF322Q6U7Q0 402 aaPredicted RBP11.97□□□□□ -0.49
PTCD1-201ENST00000292478 CSNK2A3Q8NEV1 391 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 OR4M2Q8NGB6 313 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 BRIX1Q8TDN6 353 aaKnown RBP11.97□□□□□ -0.49
PTCD1-201ENST00000292478 C4orf36Q96KX1 117 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 SFXN2Q96NB2 322 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 SPIN2AQ99865 258 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 SPIN2BQ9BPZ2 258 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 OR10A5Q9H207 317 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 OR10A2Q9H208 303 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 KLHL13Q9P2N7 655 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 CD300AQ9UGN4 299 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 KLK4Q9Y5K2 254 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 NHSL1Q5SYE7 1610 aa11.97□□□□□ -0.49
PTCD1-201ENST00000292478 NPIPA5A0A0B4J1W7 369 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 PCP4L1A6NKN8 68 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 NPIPA7E9PJI5 369 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 NPIPA8P0DM63 369 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 CAMK2DQ13557 499 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 KIAA1211LQ6NV74 962 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 CHTF18Q8WVB6 975 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 PRRT1Q99946 306 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 DNTTIP1Q9H147 329 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 CXCL16Q9H2A7 254 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 PPIL3Q9H2H8 161 aaKnown RBP11.96□□□□□ -0.49
PTCD1-201ENST00000292478 CDH20Q9HBT6 801 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 CUTCQ9NTM9 273 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 C7orf72A4D263 438 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 A6NLC8 198 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 TACR1P25103 407 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 PRKAR1BP31321 381 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 DAPP51397 102 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 GPR50Q13585 617 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 MLC1Q15049 377 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 CNN3Q15417 329 aaKnown RBP11.96□□□□□ -0.49
PTCD1-201ENST00000292478 CCDC58Q4VC31 144 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 TMEM53Q6P2H8 277 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 MBOAT2Q6ZWT7 520 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 SLC38A5Q8WUX1 472 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 HRASLS5Q96KN8 279 aa11.96□□□□□ -0.49
PTCD1-201ENST00000292478 UNKLQ9H9P5 680 aaKnown RBP11.96□□□□□ -0.49
PTCD1-201ENST00000292478 HMX3A6NHT5 357 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 F5H5P2 479 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 SLC16A6O15403 523 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 TAPBPO15533 448 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 IRF2P14316 349 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 CSNK1A1P48729 337 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 SLC26A5P58743 744 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 OR7A5Q15622 319 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 KIF18BQ86Y91 864 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 LIX1LQ8IVB5 337 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 C19orf47Q8N9M1 422 aaKnown RBP11.96□□□□□ -0.5
PTCD1-201ENST00000292478 ITFG2Q969R8 447 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 CHRDQ9H2X0 955 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 ATXN7L1Q9ULK2 861 aaPredicted RBP11.96□□□□□ -0.5
PTCD1-201ENST00000292478 HIDE1A8MVS5 230 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 UBFD1O14562 309 aaKnown RBP11.96□□□□□ -0.5
PTCD1-201ENST00000292478 B4GAT1O43505 415 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 TOXO94900 526 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 GABRA5P31644 462 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 OPN5Q6U736 354 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 PIWIL3Q7Z3Z3 882 aaKnown RBP11.96□□□□□ -0.5
PTCD1-201ENST00000292478 OR9A4Q8NGU2 314 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 OLIG1Q8TAK6 271 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 SYNPRQ8TBG9 265 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 NXPE3Q969Y0 559 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 HHIPQ96QV1 700 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 MACROD1Q9BQ69 325 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 STARD5Q9NSY2 213 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 PSORS1C1Q9UIG5 152 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.5
PTCD1-201ENST00000292478 COL16A1Q07092 1604 aaPredicted RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 KRBA1A5PL33 1030 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 TRIM64A6NGJ6 449 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 EEF1E1-BLOC1S5C9J1V9 151 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 CAPNS1P04632 268 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms