RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 JMJD1CQ15652 2540 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 NSG1A0A0A6YYJ2 146 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 J3QRK9 145 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 HRKO00198 91 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 SYT5O00445 386 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 TP53I11O14683 189 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 DPM1O60762 260 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ABCB7O75027 752 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 KCNK2O95069 426 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 P04436 131 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 BCHEP06276 602 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 PRKAR1BP31321 381 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 CDC42P60953 191 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 MS4A2Q01362 244 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 RHDQ02161 417 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 SCN1BQ07699 218 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 IL10RAQ13651 578 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF141Q15928 474 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 LIN52Q52LA3 116 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 EIPR1Q53HC9 387 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 HSDL2Q6YN16 418 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 IGFN1Q86VF2 1251 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 DHRSXQ8N5I4 330 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 RNF138Q8WVD3 245 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 DNAJC9Q8WXX5 260 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 SLC38A4Q969I6 547 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF775Q96BV0 537 aaPredicted RBP7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 FER1L6-AS2Q96M78 137 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 APOL4Q9BPW4 351 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 PINK1Q9BXM7 581 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 ARMC1Q9NVT9 282 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 TESMINQ9Y4I5 508 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 PCSK5Q92824 1860 aa7.77□□□□□ -1.17
PTPDC1-201ENST00000288976 A0A1W2PQD3 144 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF891A8MT65 544 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 TSC22D2O75157 780 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 MFN2O95140 757 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 SERPINA7P05543 415 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 NUDT7P0C024 238 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 PABPC4LP0CB38 370 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 SH3BGRP55822 239 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 PLP2Q04941 152 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 TSC22D1Q15714 1073 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 SLC16A11Q8NCK7 471 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 RAB8BQ92930 207 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 OR51B6Q9H340 312 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 DENND2DQ9H6A0 471 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 UBAP1Q9NZ09 502 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 B4GALT7Q9UBV7 327 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 GMPPBQ9Y5P6 360 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 TRBV11-1A0A0K0K1C0 115 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 G3V3Y1 287 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 AHSA1O95433 338 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 C1QCP02747 245 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 TPOP07202 933 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 KDELR2P33947 212 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 SFTPDP35247 375 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 ADH7P40394 386 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 RRADP55042 308 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 SMIM11AP58511 58 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 RPS26P62854 115 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 CARD17Q5XLA6 110 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 CCDC103Q8IW40 242 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 BCORP1Q8N888 145 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 OR5D16Q8NGK9 328 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 OR2AJ1Q8NGZ0 328 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 TRMT10AQ8TBZ6 339 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 RORBQ92753 470 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 SECISBP2Q96T21 854 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 SDF2Q99470 211 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 TRIM8Q9BZR9 551 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 AMBNQ9NP70 447 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 TMEM138Q9NPI0 162 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 FBXL4Q9UKA2 621 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 CPAMD8Q8IZJ3 1885 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 PRAMEF27A3QJZ7 478 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 OR2W5A6NFC9 320 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 TRIM64A6NGJ6 449 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 PLATP00750 562 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 CHRM4P08173 479 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 FCGR1AP12314 374 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 GABRA3P34903 492 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 OMPP47874 163 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 ID4P47928 161 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 PNLIPRP2P54317 469 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 MED22Q15528 200 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 RSBN1Q5VWQ0 802 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF321PQ8N8H1 164 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 ANKFN1Q8N957 763 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 USB1Q9BQ65 265 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 IFT27Q9BW83 186 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 TRIM2Q9C040 744 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 SLC38A1Q9H2H9 487 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 MCUBQ9NWR8 336 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 NKIRAS2Q9NYR9 191 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 DTX4Q9Y2E6 619 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 USF3Q68DE3 2245 aa7.76□□□□□ -1.17
PTPDC1-201ENST00000288976 hCG_2039718K7EN88 272 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 ACOT7O00154 380 aa7.75□□□□□ -1.17
PTPDC1-201ENST00000288976 HSPA12AO43301 675 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms