RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 ADAMTS16Q8TE57 1224 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 CA5BP1Q8WTZ4 195 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 NUDT8Q8WV74 236 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 KAT2AQ92830 837 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 UFD1Q92890 307 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 IL4I1Q96RQ9 567 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 MED18Q9BUE0 208 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 FUNDC2Q9BWH2 189 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 GABARAPL3Q9BY60 117 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 SACM1LQ9NTJ5 587 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 TBC1D29Q9UFV1 150 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 KCNS2Q9ULS6 477 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 SLC5A6Q9Y289 635 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 NUP214P35658 2090 aaPredicted RBP6.47□□□□□ -1.37
VPS8-201ENST00000287546 PLXNA4Q9HCM2 1894 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 LRRC30A6NM36 301 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 SOX1O00570 391 aaPredicted RBP6.47□□□□□ -1.37
VPS8-201ENST00000287546 GFRA3O60609 400 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 TPST2O60704 377 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 ZNF432O94892 652 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 GPR75O95800 540 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 SRFP11831 508 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 CPMP14384 443 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 GDF1P27539 372 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 XCR1P46094 333 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 PLCXD2Q0VAA5 305 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 SGCAQ16586 387 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 FRMPD2BQ6IN97 320 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 OR13F1Q8NGS4 319 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 COQ8AQ8NI60 647 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 NT5CQ8TCD5 201 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 ZNF675Q8TD23 568 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 OR7D2Q96RA2 312 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 LHPPQ9H008 270 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 DCSTAMPQ9H295 470 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 KCNK12Q9HB15 430 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 GIN1Q9NXP7 522 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 GRIP1Q9Y3R0 1128 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 ZNF175Q9Y473 711 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 ALPK3Q96L96 1907 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 POM121BA6NF01 834 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 CRYM-AS1A6NIL9 109 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 CPSF4LA6NMK7 179 aaKnown RBP6.47□□□□□ -1.37
VPS8-201ENST00000287546 H3BMQ9 156 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 VILLO15195 856 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 PRAMEF4O60810 478 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 LCKP06239 509 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 CD53P19397 219 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 CD38P28907 300 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 SLC19A1P41440 591 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 HERV-K104P61576 105 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 RPS26P11Q5JNZ5 115 aaPredicted RBP6.47□□□□□ -1.37
VPS8-201ENST00000287546 PRAMEF9Q5VWM5 478 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 FAHD1Q6P587 224 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 LINC00299Q6ZSB3 139 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 ANKRD13BQ86YJ7 626 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 OR8H2Q8N162 312 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 C16orf58Q96GQ5 468 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 ZNF285Q96NJ3 590 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 CHCHD6Q9BRQ6 235 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 ACTR6Q9GZN1 396 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 MMP27Q9H306 513 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 AMBNQ9NP70 447 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 ENPP5Q9UJA9 477 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 BAIAP2Q9UQB8 552 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 PCDHGB7Q9Y5F8 929 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 GMEB1Q9Y692 573 aa6.47□□□□□ -1.37
VPS8-201ENST00000287546 CUL9Q8IWT3 2517 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 A0A0A6YYD5 115 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 TRAPPC13A5PLN9 417 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 ZNF878C9JN71 531 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 TMPRSS11DO60235 418 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 IL2RAP01589 272 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 PRKAR1BP31321 381 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 ACSL1P33121 698 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 NUDT6P53370 316 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 RAB38P57729 211 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 ARPC4P59998 168 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 GMFBP60983 142 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 ISL1P61371 349 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 PPP2CBP62714 309 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 PPP2CAP67775 309 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 SHC2P98077 582 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 GPR18Q14330 331 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 EIF2S3LQ2VIR3 472 aaKnown RBP6.46□□□□□ -1.37
VPS8-201ENST00000287546 PERM1Q5SV97 790 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 C6orf183Q5T699 404 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 VHLLQ6RSH7 139 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 GFRALQ6UXV0 394 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 GDPGP1Q6ZNW5 385 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 TRIM73Q86UV7 250 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 ZNF619Q8N2I2 560 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 ZNF433Q8N7K0 673 aaPredicted RBP6.46□□□□□ -1.37
VPS8-201ENST00000287546 FAM110BQ8TC76 370 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 MUL1Q969V5 352 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 NECAB3Q96P71 396 aaPredicted RBP6.46□□□□□ -1.37
VPS8-201ENST00000287546 ZNF559Q9BR84 538 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 TSSK6Q9BXA6 273 aa6.46□□□□□ -1.37
VPS8-201ENST00000287546 NDRG4Q9ULP0 352 aaKnown RBP6.46□□□□□ -1.37
VPS8-201ENST00000287546 WDR37Q9Y2I8 494 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms