RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 ZNF440Q8IYI8 595 aa19.82■□□□□ 0.76
PDLIM3-203ENST00000284771 LSMEM1Q8N8F7 131 aa19.82■□□□□ 0.76
PDLIM3-203ENST00000284771 TMEM178AQ8NBL3 297 aa19.82■□□□□ 0.76
PDLIM3-203ENST00000284771 ADAMTS16Q8TE57 1224 aa19.82■□□□□ 0.76
PDLIM3-203ENST00000284771 MFRPQ9BY79 579 aa19.82■□□□□ 0.76
PDLIM3-203ENST00000284771 ACAD8Q9UKU7 415 aa19.82■□□□□ 0.76
PDLIM3-203ENST00000284771 MED12Q93074 2177 aa19.82■□□□□ 0.76
PDLIM3-203ENST00000284771 NBEAQ8NFP9 2946 aa19.82■□□□□ 0.76
PDLIM3-203ENST00000284771 TLN1Q9Y490 2541 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 ANKUB1A6NFN9 424 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 CPSF4LA6NMK7 179 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 KLRC4-KLRK1H3BQV0 150 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 CDC40O60508 579 aaKnown RBP eCLIP19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 MEOX1P50221 254 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 GANABQ14697 944 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 OR1Q1Q15612 314 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 ASB18Q6ZVZ8 466 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 LILRA2Q8N149 483 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 TOR1AIP2Q8NFQ8 470 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 ARHGAP9Q9BRR9 750 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 UBQLN3Q9H347 655 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 EVA1AQ9H8M9 152 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 ZFP64Q9NPA5 681 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 RHCGQ9UBD6 479 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 TESQ9UGI8 421 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 FMO6PO60774 539 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 CBR3O75828 277 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 NUDT14O95848 222 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 ELAVL4P26378 380 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 FOXK1P85037 733 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 CBFBQ13951 182 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 ZNF169Q14929 603 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 ZNF605Q86T29 641 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 RANBP3LQ86VV4 465 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 ZFP62Q8NB50 900 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 ZNF597Q96LX8 424 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 TUBD1Q9UJT1 453 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 VDAC3Q9Y277 283 aa19.81■□□□□ 0.76
PDLIM3-203ENST00000284771 FAAHO00519 579 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 GLSO94925 669 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 RHCEP18577 417 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 SLC6A8P48029 635 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 SUMO3P55854 103 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 QPRTQ15274 297 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 PLEKHN1Q494U1 663 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 RNFT1Q5M7Z0 435 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 HMBOX1Q6NT76 420 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 ZFP1Q6P2D0 407 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 AAGABQ6PD74 315 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 OR4K17Q8NGC6 315 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 C9orf43Q8TAL5 461 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 LRTOMTQ8WZ04 291 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 C1GALT1C1Q96EU7 318 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 ZNF559Q9BR84 538 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 TTTY12Q9BZ98 90 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 MED17Q9NVC6 651 aa19.8■□□□□ 0.76
PDLIM3-203ENST00000284771 H0Y3Z8 333 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 MGRN1O60291 552 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 ZIC3O60481 467 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 LYPD3O95274 346 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 NTN1O95631 604 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 PGCP20142 388 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 SESN3P58005 492 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 PMP22Q01453 160 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 PPP1R8Q12972 351 aaKnown RBP19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 NADK2Q4G0N4 442 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 C10orf67Q8IYJ2 551 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 CADM2Q8N3J6 435 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 STMN2Q93045 179 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 PRRC1Q96M27 445 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 ADNPQ9H2P0 1102 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 NMNAT1Q9HAN9 279 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 NTN4Q9HB63 628 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 MAN2C1Q9NTJ4 1040 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 VNN3Q9NY84 501 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 B3GNT3Q9Y2A9 372 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 C15orf41Q9Y2V0 281 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 ATRXP46100 2492 aa19.79■□□□□ 0.76
PDLIM3-203ENST00000284771 A0A0B4J2E0 115 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 A0A1B0GWA3 101 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 A0A1B0GX12 115 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 HNRNPRO43390 633 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 CST1P01037 141 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 PRKCAP17252 672 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 ITGA2P17301 1181 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 FOXD4Q12950 439 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 ST3GAL2Q16842 350 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 PCSK4Q6UW60 755 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 ZNF563Q8TA94 476 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 PIP5K1AQ99755 562 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 PKP2Q99959 881 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 TRIM2Q9C040 744 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 ADAM19Q9H013 955 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 PTGES2Q9H7Z7 377 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 AGPAT4Q9NRZ5 378 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 ACER3Q9NUN7 267 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 TAS2R10Q9NYW0 307 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 RIMS3Q9UJD0 308 aa19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 BOKQ9UMX3 212 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-203ENST00000284771 LHX6Q9UPM6 363 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms