RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 MINDY1Q8N5J2 469 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 DMBX1Q8NFW5 382 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 C11orf49Q9H6J7 331 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 PELI2Q9HAT8 420 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 ISYNA1Q9NPH2 558 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 SMOXQ9NWM0 555 aa8.24□□□□□ -1.09
NIPBL-201ENST00000282516 DCDC2BA2VCK2 349 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 MROH6A6NGR9 719 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 IGHG1P01857 330 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ADH4P08319 380 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 TIMP2P16035 220 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 HTRA4P83105 476 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 TEAD2Q15562 447 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 SLC10A6Q3KNW5 377 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 SYPL2Q5VXT5 272 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 FBXW12Q6X9E4 464 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF546Q86UE3 836 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CD163Q86VB7 1156 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 C1orf87Q8N0U7 546 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 FAM71F1Q96KD3 344 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 TMEM181Q9P2C4 612 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 LRIT2A6NDA9 550 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 HIDE1A8MVS5 230 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 PPP3CBP16298 524 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CRHBPP24387 322 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 GIFP27352 417 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 LAP3P28838 519 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 PPT1P50897 306 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 TNK1Q13470 666 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ZMAT1Q5H9K5 638 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CNKSR3Q6P9H4 555 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ADGRG3Q86Y34 549 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 FBXL18Q96ME1 805 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 SLC2A13Q96QE2 648 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ANKRD19PQ9H560 264 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 SLC35A3Q9Y2D2 325 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 GPR52Q9Y2T5 361 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 SULT2B1O00204 365 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 MT-ND4P03905 459 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 OSMP13725 252 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 MMP12P39900 470 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 OR10R2Q8NGX6 335 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ADAMTS16Q8TE57 1224 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 SAT2Q96F10 170 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 KATNB1Q9BVA0 655 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 NUDT9Q9BW91 350 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 RHBDD3Q9Y3P4 386 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ARHGEF15O94989 841 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CLEC3BP05452 202 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 DEFA4P12838 97 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 MEP1BQ16820 701 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 TMEM200AQ86VY9 491 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 SLC15A4Q8N697 577 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 OR52N2Q8NGI0 321 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 FCRL3Q96P31 734 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 QRSL1Q9H0R6 528 aaKnown RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CHRNA9Q9UGM1 479 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 AK6Q9Y3D8 172 aaKnown RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ETV1P50549 477 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 PMPCAQ10713 525 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 OR56B1Q8NGI3 324 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 GTF2H4Q92759 462 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 DNAJA3Q96EY1 480 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 HHIPL1Q96JK4 782 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 FCRL1Q96LA6 429 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 FEVQ99581 238 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 LIN7BQ9HAP6 207 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 PURGQ9UJV8 347 aaKnown RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 LOC285095A0A1B0GVY8 99 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 PROS1P07225 676 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 IGFBP1P08833 259 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CD63P08962 238 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 SFTPDP35247 375 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 PIGFQ07326 219 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 GAB1Q13480 694 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 P2RY14Q15391 338 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 SAP130Q9H0E3 1048 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CAPNS1P04632 268 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 NUDT1P36639 197 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CSN1S1P47710 185 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 PSMB3P49720 205 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ACSM3Q53FZ2 586 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 TECPR1Q7Z6L1 1165 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CPOQ8IVL8 374 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 MCATQ8IVS2 390 aaKnown RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 HUS1BQ8NHY5 278 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 KCTD3Q9Y597 815 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 BCL9O00512 1426 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 NUDT21O43809 227 aaKnown RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CST3P01034 146 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CTRB1P17538 263 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 Q1RN00 199 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 CTRB2Q6GPI1 263 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 COX15Q7KZN9 410 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 ECHDC3Q96DC8 303 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 DHRS9Q9BPW9 319 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 FAM173AQ9BQD7 235 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 GNB4Q9HAV0 340 aa8.23□□□□□ -1.09
NIPBL-201ENST00000282516 NOX3Q9HBY0 568 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms