RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 NANOGP1Q8N7R0 232 aa16.52■□□□□ 0.24
CAPN1-201ENST00000279247 ZNF559Q9BR84 538 aa16.52■□□□□ 0.24
CAPN1-201ENST00000279247 PRRG3Q9BZD7 231 aa16.52■□□□□ 0.24
CAPN1-201ENST00000279247 MARCH7Q9H992 704 aa16.52■□□□□ 0.24
CAPN1-201ENST00000279247 RHBDL2Q9NX52 303 aa16.52■□□□□ 0.24
CAPN1-201ENST00000279247 SERTAD3Q9UJW9 196 aa16.52■□□□□ 0.24
CAPN1-201ENST00000279247 FBXL4Q9UKA2 621 aa16.52■□□□□ 0.24
CAPN1-201ENST00000279247 PATE3B3GLJ2 98 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 KLF4O43474 513 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 REM1O75628 298 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 PPP1R3DO95685 299 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 ATP12AP54707 1039 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 FUT7Q11130 342 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 CBLN3Q6UW01 205 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 ATCAYQ86WG3 371 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 OR51L1Q8NGJ5 315 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 KLHDC3Q9BQ90 382 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.52■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF223Q9UK11 482 aaPredicted RBP16.52■□□□□ 0.23
CAPN1-201ENST00000279247 FREM2Q5SZK8 3169 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 ADAMTS9Q9P2N4 1935 aa16.52■□□□□ 0.23
CAPN1-201ENST00000279247 OIP5O43482 229 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 PFDN1O60925 122 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 LYPD3O95274 346 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 TSPAN19P0C672 248 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 CD226Q15762 336 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 USP43Q70EL4 1123 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 CXXC5Q7LFL8 322 aaKnown RBP16.51■□□□□ 0.23
CAPN1-201ENST00000279247 SECISBP2Q96T21 854 aaKnown RBP16.51■□□□□ 0.23
CAPN1-201ENST00000279247 TM9SF2Q99805 663 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 G6PC3Q9BUM1 346 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 HMG20AQ9NP66 347 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 OSGIN1Q9UJX0 560 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 GMEB2Q9UKD1 530 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 LSM2Q9Y333 95 aaKnown RBP16.51■□□□□ 0.23
CAPN1-201ENST00000279247 A0A0B4J2E0 115 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 A0A1B0GX12 115 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 DSCR3O14972 297 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 KHNYNO15037 678 aaKnown RBP16.51■□□□□ 0.23
CAPN1-201ENST00000279247 EPHA4P54764 986 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 IGLV3-21P80748 117 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-201ENST00000279247 EFNB1P98172 346 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF404Q494X3 552 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 C16orf47Q6ZP98 133 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-201ENST00000279247 C10orf53Q8N6V4 93 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 OR5M3Q8NGP4 307 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 SLC2A12Q8TD20 617 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 TAPBPLQ9BX59 468 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 SNTNA6NMZ2 147 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 NR0B1P51843 470 aaKnown RBP16.51■□□□□ 0.23
CAPN1-201ENST00000279247 COPZ1P61923 177 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 SERTAD2Q14140 314 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 KLHL22Q53GT1 634 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 OR6Q1Q8NGQ2 317 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 TM9SF4Q92544 642 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 SMAD5Q99717 465 aaKnown RBP16.51■□□□□ 0.23
CAPN1-201ENST00000279247 SMOC1Q9H4F8 434 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 SNTG1Q9NSN8 517 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 DIMT1Q9UNQ2 313 aaKnown RBP16.51■□□□□ 0.23
CAPN1-201ENST00000279247 PCDHGA3Q9Y5H0 932 aa16.51■□□□□ 0.23
CAPN1-201ENST00000279247 SERINC4A6NH21 518 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 SCG5P05408 212 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 PSMA1P25786 263 aaKnown RBP16.5■□□□□ 0.23
CAPN1-201ENST00000279247 PROKR2Q8NFJ6 384 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 KBTBD8Q8NFY9 601 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 FNDC8Q8TC99 324 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 C1GALT1C1Q96EU7 318 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 DEPDC7Q96QD5 511 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 POLE4Q9NR33 117 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 FITM1A5D6W6 292 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 GTPBP1O00178 669 aaKnown RBP16.5■□□□□ 0.23
CAPN1-201ENST00000279247 SIGLEC6O43699 453 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 CHP2O43745 196 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 GDF9O60383 454 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 CLPSP04118 112 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 SLC37A1P57057 533 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 RHAGQ02094 409 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 APOOLQ6UXV4 268 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 CROCCP3Q8IVE0 287 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 EID2Q8N6I1 236 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 ADAMTS18Q8TE60 1221 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 FGF11Q92914 225 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 DTNBP1Q96EV8 351 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 DACH2Q96NX9 599 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 BCL7BQ9BQE9 202 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 NUDT9Q9BW91 350 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 PRODH2Q9UF12 536 aa16.5■□□□□ 0.23
CAPN1-201ENST00000279247 PCNX3Q9H6A9 2034 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 RGS5O15539 181 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 DYRK3O43781 588 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 FGFBP1Q14512 234 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF846Q147U1 533 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 C22orf42Q6IC83 251 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF574Q6ZN55 896 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-201ENST00000279247 PHC2Q8IXK0 858 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 D2HGDHQ8N465 521 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 SIRT6Q8N6T7 355 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 ASPNQ9BXN1 380 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 H3BMH7 237 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 TIAF1O95411 115 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms