RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 KIR2DS3K7RE56 304 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 GKN3PP0CG01 181 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 SLC35E2P0CK97 266 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 DRD1P21728 446 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 CAV3P56539 151 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 GAS6Q14393 721 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 KIR2DS5Q14953 304 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 QPRTQ15274 297 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 Q8N402 240 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 TMEM99Q8N816 258 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 OR10G6Q8NH81 332 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 ENKURQ8TC29 256 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 ANKRD9Q96BM1 317 aaPredicted RBP23.17■■□□□ 1.3
ROM1-201ENST00000278833 OTULINQ96BN8 352 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 SENP5Q96HI0 755 aaPredicted RBP23.17■■□□□ 1.3
ROM1-201ENST00000278833 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.17■■□□□ 1.3
ROM1-201ENST00000278833 FBXO34Q9NWN3 711 aa23.17■■□□□ 1.3
ROM1-201ENST00000278833 PRR23D1E9PI22 279 aaPredicted RBP23.16■■□□□ 1.3
ROM1-201ENST00000278833 LDB3O75112 727 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 MT-ND5P03915 603 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 PRR23D2P0DMB1 279 aaPredicted RBP23.16■■□□□ 1.3
ROM1-201ENST00000278833 APEX1P27695 318 aaKnown RBP23.16■■□□□ 1.3
ROM1-201ENST00000278833 NKX2-5P52952 324 aaPredicted RBP23.16■■□□□ 1.3
ROM1-201ENST00000278833 ACTC1P68032 377 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 ACTA1P68133 377 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 POU4F2Q12837 409 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 SF3A2Q15428 464 aaKnown RBP23.16■■□□□ 1.3
ROM1-201ENST00000278833 ZFP69Q49AA0 526 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 TPRA1Q86W33 373 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 SLC37A3Q8NCC5 494 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 MMP28Q9H239 520 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 TP63Q9H3D4 680 aaPredicted RBP23.16■■□□□ 1.3
ROM1-201ENST00000278833 ISG20L2Q9H9L3 353 aaKnown RBP23.16■■□□□ 1.3
ROM1-201ENST00000278833 ATP13A2Q9NQ11 1180 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 CPNE7Q9UBL6 633 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 IL20RAQ9UHF4 553 aa23.16■■□□□ 1.3
ROM1-201ENST00000278833 ZNF860A6NHJ4 632 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 CD8B2A6NJW9 211 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 A8MU76 341 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 CBX7O95931 251 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 CT62P0C5K7 136 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 CD8BP10966 210 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 S100A1P23297 94 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 ACSL1P33121 698 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 ID2Q02363 134 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 SF3B4Q15427 424 aaKnown RBP eCLIP23.15■■□□□ 1.3
ROM1-201ENST00000278833 TBRG1Q3YBR2 411 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 CCDC92Q53HC0 331 aaPredicted RBP23.15■■□□□ 1.3
ROM1-201ENST00000278833 THSD4Q6ZMP0 1018 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 PRSS41Q7RTY9 318 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 ARHGEF39Q8N4T4 335 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 CSNK1A1LQ8N752 337 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 LSMEM1Q8N8F7 131 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 TEX19Q8NA77 164 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 C19orf18Q8NEA5 215 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 TRAF4Q9BUZ4 470 aaPredicted RBP23.15■■□□□ 1.3
ROM1-201ENST00000278833 ATG2BQ96BY7 2078 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 DAPL1A0PJW8 107 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 PRKAR1AP10644 381 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 TDGQ13569 410 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 ZNF362Q5T0B9 420 aaPredicted RBP23.15■■□□□ 1.3
ROM1-201ENST00000278833 ABI3BPQ7Z7G0 1075 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 OR13C2Q8NGS9 318 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 CAPSLQ8WWF8 208 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 PTP4A1Q93096 173 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 NDC1Q9BTX1 674 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 TRIM2Q9C040 744 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 ENKD1Q9H0I2 346 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 MEPEQ9NQ76 525 aaPredicted RBP23.15■■□□□ 1.3
ROM1-201ENST00000278833 TRPV5Q9NQA5 729 aa23.15■■□□□ 1.3
ROM1-201ENST00000278833 TRBV23OR9-2A0A075B6M9 112 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 A0A0B4J293 547 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 RIIAD1A6NNX1 92 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 HRO43593 1189 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 SC5DO75845 299 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 SBK2P0C263 348 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 RABIFP47224 123 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 TIGD3Q6B0B8 471 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 ARHGAP11AQ6P4F7 1023 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 RNF31Q96EP0 1072 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 TEAD3Q99594 435 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 IFT27Q9BW83 186 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 HCAR1Q9BXC0 346 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 GSDMCQ9BYG8 508 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 ADGRL4Q9HBW9 690 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 B3GAT2Q9NPZ5 323 aa23.14■■□□□ 1.29
ROM1-201ENST00000278833 SIRT4Q9Y6E7 314 aaPredicted RBP23.14■■□□□ 1.29
ROM1-201ENST00000278833 GXYLT2A0PJZ3 443 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 SMIM30A4D0T7 59 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 BLACEA4D250 179 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 CENPXA8MT69 81 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 TNFP01375 233 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 ZNF3P17036 446 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 GABRA3P34903 492 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 CLDN20P56880 219 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 LINC00114Q6XXX2 140 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 LRRC28Q86X40 367 aaPredicted RBP23.13■■□□□ 1.29
ROM1-201ENST00000278833 LIX1LQ8IVB5 337 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 OR5W2Q8NH69 310 aa23.13■■□□□ 1.29
ROM1-201ENST00000278833 RNF170Q96K19 258 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms