RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 FGF20Q9NP95 211 aaPredicted RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 ZCCHC3Q9NUD5 404 aaKnown RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 PTTG3PQ9NZH4 202 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 CTSFQ9UBX1 484 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 GPR55Q9Y2T6 319 aaPredicted RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 LRIT2A6NDA9 550 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 FAM25EA8MYX2 175 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 HMGN4O00479 90 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ECDO95905 644 aaPredicted RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 CLTBP09497 229 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ATP1B2P14415 290 aaPredicted RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 GRPRP30550 384 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 KCNJ5P48544 419 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 CDK5Q00535 292 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 FAM26DQ5JW98 314 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 PLPP4Q5VZY2 271 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ZNF660Q6AZW8 331 aaPredicted RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 OR7E24Q6IFN5 339 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 Q6ZVL8 140 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ADCK2Q7Z695 626 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 TMED4Q7Z7H5 227 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 CMTM4Q8IZR5 234 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 OR5J2Q8NH18 312 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 PEX11GQ96HA9 241 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 C7orf50Q9BRJ6 194 aaKnown RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 DNTTIP1Q9H147 329 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 C11orf49Q9H6J7 331 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 MAN2C1Q9NTJ4 1040 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 DPP7Q9UHL4 492 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ING1Q9UK53 422 aaPredicted RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 STON1Q9Y6Q2 735 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 PRAMEF27A3QJZ7 478 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 OR6C68A6NDL8 312 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
HERC6-202ENST00000273960 NFYBP25208 207 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 LUMP51884 338 aaPredicted RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 RBM39Q14498 530 aaKnown RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 C4orf46Q504U0 113 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 FCRLAQ7L513 359 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 VRK2Q86Y07 508 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 CHST14Q8NCH0 376 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 PDCD1LG2Q9BQ51 273 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 IFT27Q9BW83 186 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ZNF230Q9UIE0 474 aaPredicted RBP11.94□□□□□ -0.5
HERC6-202ENST00000273960 CLEC4EQ9ULY5 219 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 MOKQ9UQ07 419 aa11.94□□□□□ -0.5
HERC6-202ENST00000273960 ZNF705EA8MWA4 302 aaPredicted RBP11.93□□□□□ -0.5
HERC6-202ENST00000273960 KLHL18O94889 574 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 FARS2O95363 451 aaKnown RBP11.93□□□□□ -0.5
HERC6-202ENST00000273960 SERPINA3P01011 423 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 CSN2P05814 226 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 PRPH2P23942 346 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 HOXA1P49639 335 aaPredicted RBP11.93□□□□□ -0.5
HERC6-202ENST00000273960 H2BFSP57053 126 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 TBPL1P62380 186 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 GPNMBQ14956 572 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 PUSL1Q8N0Z8 303 aaKnown RBP11.93□□□□□ -0.5
HERC6-202ENST00000273960 THAP6Q8TBB0 222 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 DVL3Q92997 716 aaPredicted RBP11.93□□□□□ -0.5
HERC6-202ENST00000273960 RFKQ969G6 155 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 TRIM43Q96BQ3 446 aaPredicted RBP11.93□□□□□ -0.5
HERC6-202ENST00000273960 SEC22AQ96IW7 307 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 OR14A2Q96R54 314 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 CERS4Q9HA82 394 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 BACE2Q9Y5Z0 518 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 FEZF1A0PJY2 475 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 ACOD1A6NK06 481 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 PYCARD-AS1I3L0S3 204 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 VNN2O95498 520 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 WDPCPO95876 746 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 UQCRC2P22695 453 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 IMPA1P29218 277 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 NAA10P41227 235 aaPredicted RBP11.93□□□□□ -0.5
HERC6-202ENST00000273960 MTNR1BP49286 362 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 ANXA11P50995 505 aaKnown RBP11.93□□□□□ -0.5
HERC6-202ENST00000273960 METTL11BQ5VVY1 283 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 GRHL2Q6ISB3 625 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 CPXM2Q8N436 756 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 CHCHD4Q8N4Q1 142 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 C12orf45Q8N5I9 185 aaPredicted RBP11.93□□□□□ -0.5
HERC6-202ENST00000273960 RFLNBQ8N5W9 214 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 PDXPQ96GD0 296 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 ENKD1Q9H0I2 346 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 KCNE3Q9Y6H6 103 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 F5P12259 2224 aa11.93□□□□□ -0.5
HERC6-202ENST00000273960 A8MVJ9 347 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 SELENOFO60613 162 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 UBL3O95164 117 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 LY86O95711 162 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 S100A9P06702 114 aaKnown RBP11.92□□□□□ -0.5
HERC6-202ENST00000273960 PPP3CBP16298 524 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 SMIM11AP58511 58 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 PRRT3Q5FWE3 981 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 PRAMEF13Q5VWM6 474 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 UNQ6126/PRO20091Q6UXV3 157 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 GNPDA2Q8TDQ7 276 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 TMEM255BQ8WV15 326 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 C16orf58Q96GQ5 468 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 CAPN10Q9HC96 672 aa11.92□□□□□ -0.5
HERC6-202ENST00000273960 TRIM36Q9NQ86 728 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms