RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 LCE3BQ5TA77 95 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 ALKBH2Q6NS38 261 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 SZRD1Q7Z422 152 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 C4orf33Q8N1A6 199 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 COX18Q8N8Q8 333 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 OR6Y1Q8NGX8 325 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 CEP70Q8NHQ1 597 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 PSMA8Q8TAA3 256 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 GPR119Q8TDV5 335 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 CCDC126Q96EE4 140 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 ZBED6CLQ96FA7 236 aaPredicted RBP7.93□□□□□ -1.14
TPM3-201ENST00000271850 ZNF300Q96RE9 604 aaPredicted RBP7.93□□□□□ -1.14
TPM3-201ENST00000271850 MECRQ9BV79 373 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 BTBD2Q9BX70 525 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 TRIM2Q9C040 744 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 PIGUQ9H490 435 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 CXorf56Q9H5V9 222 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 UBQLN4Q9NRR5 601 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 DUSP22Q9NRW4 184 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 GLRX2Q9NS18 164 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 PAQR5Q9NXK6 330 aaPredicted RBP7.93□□□□□ -1.14
TPM3-201ENST00000271850 SH3BP4Q9P0V3 963 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 CARD8Q9Y2G2 431 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 RNF115Q9Y4L5 304 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 ACTL7BQ9Y614 415 aa7.93□□□□□ -1.14
TPM3-201ENST00000271850 C9JVG2 144 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 H3BQF6 201 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 SLC28A1O00337 649 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 SCDO00767 359 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 PIP5K1BO14986 540 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 SMAD9O15198 467 aaKnown RBP7.92□□□□□ -1.14
TPM3-201ENST00000271850 CLOCKO15516 846 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 RGS14O43566 566 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 DNAJA2O60884 412 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 TMCC2O75069 709 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 ADAM11O75078 769 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 SYNGR4O95473 234 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 C6orf47O95873 294 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 C1QCP02747 245 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 ALOX5P09917 674 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 PTNP21246 168 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 ADH6P28332 368 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 LCN1P31025 176 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 FOXG1P55316 489 aaPredicted RBP7.92□□□□□ -1.14
TPM3-201ENST00000271850 CARD18P57730 90 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 RPS4XP62701 263 aaKnown RBP7.92□□□□□ -1.14
TPM3-201ENST00000271850 POU6F2P78424 691 aaPredicted RBP7.92□□□□□ -1.14
TPM3-201ENST00000271850 BSPH1Q075Z2 132 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 SPOCK1Q08629 439 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 TMEM176BQ3YBM2 270 aaPredicted RBP7.92□□□□□ -1.14
TPM3-201ENST00000271850 GALNTL6Q49A17 601 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 VPS26BQ4G0F5 336 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 SLC25A53Q5H9E4 307 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 DCST2Q5T1A1 773 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 CDC73Q6P1J9 531 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 ZCCHC12Q6PEW1 402 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 LRIG3Q6UXM1 1119 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 FCRLAQ7L513 359 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 TDRPQ86YL5 185 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 MISPQ8IVT2 679 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 CLEC4FQ8N1N0 589 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 KRTCAP2Q8N6L1 136 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 BANPQ8N9N5 519 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 OR5D16Q8NGK9 328 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 SPATA3Q8NHX4 192 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 PIWIL2Q8TC59 973 aaKnown RBP7.92□□□□□ -1.14
TPM3-201ENST00000271850 PHOSPHO1Q8TCT1 267 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 ZFP90Q8TF47 636 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 TWIST2Q8WVJ9 160 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 JADE3Q92613 823 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 CPNE4Q96A23 557 aaPredicted RBP7.92□□□□□ -1.14
TPM3-201ENST00000271850 STACQ99469 402 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 RHOXF2Q9BQY4 288 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 TRAF4Q9BUZ4 470 aaPredicted RBP7.92□□□□□ -1.14
TPM3-201ENST00000271850 REG4Q9BYZ8 158 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 SLCO5A1Q9H2Y9 848 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 BCO1Q9HAY6 547 aa7.92□□□□□ -1.14
TPM3-201ENST00000271850 ZCCHC3Q9NUD5 404 aaKnown RBP7.92□□□□□ -1.14
TPM3-201ENST00000271850 GOLGA8QA0A0J9YX86 632 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 GOLGA8OA6NCC3 632 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 SMIM23A6NLE4 172 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 GOLGA8NF8WBI6 632 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 GPRIN2O60269 458 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 CRCPO75575 148 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 LYZL6O75951 148 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 YES1P07947 543 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 FGF4P08620 206 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 ARAFP10398 606 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 KRT4P19013 534 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 COX5AP20674 150 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 IGHV1-2P23083 117 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 ALDH3A1P30838 453 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 OR3A2P47893 321 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 P2RX1P51575 399 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 C21orf58P58505 322 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 NAA20P61599 178 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 RPS26P62854 115 aaKnown RBP7.91□□□□□ -1.14
TPM3-201ENST00000271850 PPP2R2BQ00005 443 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 FUT5Q11128 374 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 SKP2Q13309 424 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms