RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 ZNF527Q8NB42 609 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 POGLUT1Q8NBL1 392 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 TSLPQ969D9 159 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 PLA2G12AQ9BZM1 189 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 OR8D2Q9GZM6 311 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 TGIF2Q9GZN2 237 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 OR51E2Q9H255 320 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 SLC35A3Q9Y2D2 325 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 MED31Q9Y3C7 131 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 A0A0B4J2E0 115 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 LOC100506127A0A0U1RQW1 187 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 PNMA8CA0A1B0GUJ8 204 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 A0A1B0GX12 115 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 A8MUA0 341 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 PRKYO43930 277 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 IGKV3-11P04433 115 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 SOX6P35712 828 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 ACAA2P42765 397 aaKnown RBP14.11□□□□□ -0.15
SF3B4-201ENST00000271628 GPR4P46093 362 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 PLAURQ03405 335 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 NNATQ16517 81 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 CLPPQ16740 277 aaPredicted RBP14.11□□□□□ -0.15
SF3B4-201ENST00000271628 CYP4Z2PQ8N1L4 340 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 PLPP5Q8NEB5 264 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 SLC2A12Q8TD20 617 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 CLIP3Q96DZ5 547 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 LCORQ96JN0 433 aaPredicted RBP14.11□□□□□ -0.15
SF3B4-201ENST00000271628 LRR1Q96L50 414 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 TSSK6Q9BXA6 273 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 ABCB10Q9NRK6 738 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 MKL2Q9ULH7 1088 aa14.11□□□□□ -0.15
SF3B4-201ENST00000271628 IGHV5-10-1A0A0J9YXX1 117 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 FRG2CA6NGY1 282 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 SERINC4A6NH21 518 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 EFCAB7A8K855 629 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 LYPD3O95274 346 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 PTTG1O95997 202 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 GRK5P34947 590 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 ADH7P40394 386 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 ETV6P41212 452 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 RBM34P42696 430 aaKnown RBP14.1□□□□□ -0.15
SF3B4-201ENST00000271628 DUSP3P51452 185 aaPredicted RBP14.1□□□□□ -0.15
SF3B4-201ENST00000271628 RPL13AP3Q6NVV1 102 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 SLC23A3Q6PIS1 610 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 ZNF620Q6ZNG0 422 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 NCCRP1Q6ZVX7 275 aaPredicted RBP14.1□□□□□ -0.15
SF3B4-201ENST00000271628 TMPRSS11FQ6ZWK6 438 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 ZNF440Q8IYI8 595 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 OR2T33Q8NG76 320 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 OR4C3Q8NH37 302 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 TMEM163Q8TC26 289 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 ZNF721Q8TF20 911 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 TMEM80Q96HE8 168 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 OR6C1Q96RD1 312 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 MGLLQ99685 303 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 UBQLN4Q9NRR5 601 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 MED17Q9NVC6 651 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 DNAJC27Q9NZQ0 273 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 COPS7AQ9UBW8 275 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 ZNF223Q9UK11 482 aaPredicted RBP14.1□□□□□ -0.15
SF3B4-201ENST00000271628 RARRES3Q9UL19 164 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 CDH10Q9Y6N8 788 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 CCRL2O00421 344 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 PIP5K1CO60331 668 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 SNX4O95219 450 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 IL33O95760 270 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 DDAH2O95865 285 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 CSTAP01040 98 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 SYPP08247 313 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 HSMCR30P0CW71 290 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 CKMT1AP12532 417 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 HPGDP15428 266 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 BMP7P18075 431 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 LCN1P31025 176 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 RNF144AP50876 292 aaPredicted RBP14.1□□□□□ -0.15
SF3B4-201ENST00000271628 CTBP2P56545 445 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 TMEM44Q2T9K0 475 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 KLHL26Q53HC5 615 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 STEAP3Q658P3 488 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 ULK3Q6PHR2 472 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 MEX3DQ86XN8 651 aaKnown RBP14.1□□□□□ -0.15
SF3B4-201ENST00000271628 OR8D4Q8NGM9 314 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 WDR36Q8NI36 951 aaKnown RBP14.1□□□□□ -0.15
SF3B4-201ENST00000271628 HPS1Q92902 700 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 CHCHD6Q9BRQ6 235 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 CENPOQ9BU64 300 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 VN1R1Q9GZP7 353 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 RACGAP1Q9H0H5 632 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 POLE4Q9NR33 117 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 SIDT1Q9NXL6 827 aaKnown RBP14.1□□□□□ -0.15
SF3B4-201ENST00000271628 RPS6KB2Q9UBS0 482 aa14.1□□□□□ -0.15
SF3B4-201ENST00000271628 C2orf92A0A1B0GVN3 265 aa14.09□□□□□ -0.15
SF3B4-201ENST00000271628 A0A1B0GWA3 101 aa14.09□□□□□ -0.15
SF3B4-201ENST00000271628 IRGMA1A4Y4 181 aa14.09□□□□□ -0.15
SF3B4-201ENST00000271628 UNC119BA6NIH7 251 aa14.09□□□□□ -0.15
SF3B4-201ENST00000271628 ARHGAP33O14559 1287 aa14.09□□□□□ -0.15
SF3B4-201ENST00000271628 CDC42EP2O14613 210 aa14.09□□□□□ -0.15
SF3B4-201ENST00000271628 TBX1O43435 398 aa14.09□□□□□ -0.15
SF3B4-201ENST00000271628 NTN1O95631 604 aa14.09□□□□□ -0.15
SF3B4-201ENST00000271628 HMGN1P05114 100 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms