RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 KCTD21Q4G0X4 260 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 LINC00471Q8N535 108 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 RIBC2Q9H4K1 309 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 PAPOLBQ9NRJ5 636 aaKnown RBP22.55■■□□□ 1.2
SSBP4-201ENST00000270061 RLIMQ9NVW2 624 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 HSPE1-MOB4S4R3N1 261 aa22.55■■□□□ 1.2
SSBP4-201ENST00000270061 TRIM64A6NGJ6 449 aa22.54■■□□□ 1.2
SSBP4-201ENST00000270061 BCKDKO14874 412 aa22.54■■□□□ 1.2
SSBP4-201ENST00000270061 DDAH2O95865 285 aa22.54■■□□□ 1.2
SSBP4-201ENST00000270061 UQCRFS1P47985 274 aa22.54■■□□□ 1.2
SSBP4-201ENST00000270061 OR14A16Q8NHC5 309 aa22.54■■□□□ 1.2
SSBP4-201ENST00000270061 DAZLQ92904 295 aaKnown RBP22.54■■□□□ 1.2
SSBP4-201ENST00000270061 ART5Q96L15 291 aa22.54■■□□□ 1.2
SSBP4-201ENST00000270061 G6PC3Q9BUM1 346 aa22.54■■□□□ 1.2
SSBP4-201ENST00000270061 RNF32Q9H0A6 362 aa22.54■■□□□ 1.2
SSBP4-201ENST00000270061 ZNF556Q9HAH1 456 aa22.54■■□□□ 1.2
SSBP4-201ENST00000270061 NDRG4Q9ULP0 352 aaKnown RBP22.54■■□□□ 1.2
SSBP4-201ENST00000270061 TPST2O60704 377 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 WDPCPO95876 746 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 F10P00742 488 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 GNLYP22749 145 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 CLK3P49761 638 aaKnown RBP22.53■■□□□ 1.2
SSBP4-201ENST00000270061 TNFSF10P50591 281 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 IL1RL1Q01638 556 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 H3F3CQ6NXT2 135 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 TSPYL5Q86VY4 417 aaPredicted RBP22.53■■□□□ 1.2
SSBP4-201ENST00000270061 PARP8Q8N3A8 854 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 OR9Q2Q8NGE9 314 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 OR1N1Q8NGS0 311 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 ZNF721Q8TF20 911 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 MRPS26Q9BYN8 205 aaKnown RBP22.53■■□□□ 1.2
SSBP4-201ENST00000270061 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.53■■□□□ 1.29e-7■■■□□ 18.5
SSBP4-201ENST00000270061 ARMC7Q9H6L4 198 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 ENOPH1Q9UHY7 261 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 HECTD1Q9ULT8 2610 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 CENPVL1A0A0U1RR11 272 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 RGS8P57771 180 aaPredicted RBP22.53■■□□□ 1.2
SSBP4-201ENST00000270061 ISL1P61371 349 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 FLYWCH1Q4VC44 716 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 FGD3Q5JSP0 725 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 ZNF786Q8N393 782 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 SETD9Q8NE22 299 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 OR4N2Q8NGD1 307 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 SLC7A13Q8TCU3 470 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 SLC2A12Q8TD20 617 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 PITX2Q99697 317 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 NIPSNAP1Q9BPW8 284 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 ITPAQ9BY32 194 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 POLR2J2Q9GZM3 115 aaKnown RBP22.53■■□□□ 1.2
SSBP4-201ENST00000270061 POLR2J3Q9H1A7 115 aaKnown RBP22.53■■□□□ 1.2
SSBP4-201ENST00000270061 ANKRD19PQ9H560 264 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 MAN2C1Q9NTJ4 1040 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 CBLCQ9ULV8 474 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 MGAT4BQ9UQ53 548 aa22.53■■□□□ 1.2
SSBP4-201ENST00000270061 TRAV17A0A0B4J275 112 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 SH3PXD2BA1X283 911 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 CDHR4A6H8M9 788 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 SAGE2PA6NJ88 616 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 AP3D1O14617 1153 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 SMNDC1O75940 238 aaKnown RBP eCLIP22.52■■□□□ 1.25e-7■■■■■ 29.1
SSBP4-201ENST00000270061 ADAP00813 363 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 IGKV1D-16P01601 117 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 IFNA8P32881 189 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 PPICP45877 212 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 APOFQ13790 326 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 ZSWIM7Q19AV6 140 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 ACER2Q5QJU3 275 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 FCRLBQ6BAA4 426 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 ZAR1Q86SH2 424 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 AQP11Q8NBQ7 271 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 FBLIM1Q8WUP2 373 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 DIO2Q92813 273 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 NTNG1Q9Y2I2 539 aa22.52■■□□□ 1.2
SSBP4-201ENST00000270061 DPPA5A6NC42 116 aa22.51■■□□□ 1.19
SSBP4-201ENST00000270061 A8MUA0 341 aa22.51■■□□□ 1.19
SSBP4-201ENST00000270061 GASTP01350 101 aa22.51■■□□□ 1.19
SSBP4-201ENST00000270061 PSMD4P55036 377 aaKnown RBP22.51■■□□□ 1.19
SSBP4-201ENST00000270061 TPD52P55327 224 aaPredicted RBP22.51■■□□□ 1.19
SSBP4-201ENST00000270061 SEC23BQ15437 767 aa22.51■■□□□ 1.19
SSBP4-201ENST00000270061 ZNF141Q15928 474 aa22.51■■□□□ 1.19
SSBP4-201ENST00000270061 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.51■■□□□ 1.19
SSBP4-201ENST00000270061 ELP5Q8TE02 316 aa22.51■■□□□ 1.19
SSBP4-201ENST00000270061 HRASLS5Q96KN8 279 aa22.51■■□□□ 1.19
SSBP4-201ENST00000270061 POLEQ07864 2286 aa22.51■■□□□ 1.19
SSBP4-201ENST00000270061 OR5H15A6NDH6 313 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 CLDN24A6NM45 220 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 NPIPB9F8W1W9 429 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 ZNF136P52737 540 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 TAS2R41P59536 307 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 ST3GAL3Q11203 375 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 MEP1AQ16819 746 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 MRPL2Q5T653 305 aaKnown RBP22.5■■□□□ 1.19
SSBP4-201ENST00000270061 BCORP1Q8N888 145 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 MORN4Q8NDC4 146 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 TSPAN14Q8NG11 270 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 OIT3Q8WWZ8 545 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 DGCR6LQ9BY27 220 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 OR8D2Q9GZM6 311 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 ABI3Q9P2A4 366 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 GMPPBQ9Y5P6 360 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms