RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 UTS2O95399 124 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 HTR1AP08908 422 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 CD63P08962 238 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 HPGDP15428 266 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 RBMS1P29558 406 aaKnown RBP14.1□□□□□ -0.15
COPS3-201ENST00000268717 FMO3P31513 532 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 EIF2S3P41091 472 aaKnown RBP14.1□□□□□ -0.15
COPS3-201ENST00000268717 CTBP2P56545 445 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 CDK5Q00535 292 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 ZBED5Q49AG3 693 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 TMEM201Q5SNT2 666 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 SLC25A30Q5SVS4 291 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 KCTD8Q6ZWB6 473 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 PRICKLE2Q7Z3G6 844 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 CPEB2Q7Z5Q1 589 aaKnown RBP14.1□□□□□ -0.15
COPS3-201ENST00000268717 NRMQ8IXM6 262 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 SPARTQ8N0X7 666 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 APCDD1LQ8NCL9 501 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 OR8J1Q8NGP2 316 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 EFHD2Q96C19 240 aaPredicted RBP14.1□□□□□ -0.15
COPS3-201ENST00000268717 VMP1Q96GC9 406 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 SIGLEC11Q96RL6 698 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 GAL3ST4Q96RP7 486 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 LPAR4Q99677 370 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 CTRCQ99895 268 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 PRRG3Q9BZD7 231 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 GPN3Q9UHW5 284 aaPredicted RBP14.1□□□□□ -0.15
COPS3-201ENST00000268717 ZNF223Q9UK11 482 aaPredicted RBP14.1□□□□□ -0.15
COPS3-201ENST00000268717 LOXL2Q9Y4K0 774 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 ZFYVE26Q68DK2 2539 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 FAM208BQ5VWN6 2430 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 ITPR1Q14643 2758 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 LOC102723996A0A087X1L8 192 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 A0A1B0GWA3 101 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 HTR3EA5X5Y0 456 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 CDRT15L2A8MXV6 281 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 C9J4A7 227 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 XPNPEP2O43895 674 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 SOX14O95416 240 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 CCL4P13236 92 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 ITIH1P19827 911 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 POU1F1P28069 291 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 IL12BP29460 328 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 GIPRP48546 466 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 SMSP52788 366 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 FOXL2P58012 376 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 RNF4P78317 190 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 LSM11P83369 360 aaKnown RBP eCLIP14.09□□□□□ -0.15
COPS3-201ENST00000268717 MVKQ03426 396 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 PRKCDQ05655 676 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 PLCXD2Q0VAA5 305 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 FOXD4Q12950 439 aaPredicted RBP14.09□□□□□ -0.15
COPS3-201ENST00000268717 TUBA3CQ13748 450 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 ULK3Q6PHR2 472 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 PAPD4Q6PIY7 484 aaKnown RBP14.09□□□□□ -0.15
COPS3-201ENST00000268717 FAM198BQ6UWH4 519 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 CASP12Q6UXS9 341 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 HSDL2Q6YN16 418 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 PRSS48Q7RTY5 328 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 GPR141Q7Z602 305 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 CCDC103Q8IW40 242 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 TEX47Q8TBZ9 253 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 DNAJA4Q8WW22 397 aaPredicted RBP14.09□□□□□ -0.15
COPS3-201ENST00000268717 OSTF1Q92882 214 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 Q96MT0 163 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 LMF1Q96S06 567 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 WDR77Q9BQA1 342 aaPredicted RBP14.09□□□□□ -0.15
COPS3-201ENST00000268717 POLDIP3Q9BY77 421 aaKnown RBP14.09□□□□□ -0.15
COPS3-201ENST00000268717 FKBP14Q9NWM8 211 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 PAK1IP1Q9NWT1 392 aaPredicted RBP14.09□□□□□ -0.15
COPS3-201ENST00000268717 SLC39A1Q9NY26 324 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 IL20Q9NYY1 176 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 FLRT3Q9NZU0 649 aa14.09□□□□□ -0.15
COPS3-201ENST00000268717 OR6C70A6NIJ9 312 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 ALG1L2C9J202 215 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 ZNF701M0R085 212 aaPredicted RBP14.08□□□□□ -0.15
COPS3-201ENST00000268717 FAM20BO75063 409 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 TNFSF15O95150 251 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 IGF2P01344 180 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 UBL4AP11441 157 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 ABCD3P28288 659 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 NR0B1P51843 470 aaKnown RBP14.08□□□□□ -0.15
COPS3-201ENST00000268717 NRG3P56975 720 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 SKP2Q13309 424 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 XAF1Q6GPH4 301 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 RPL13AP3Q6NVV1 102 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 SLC27A4Q6P1M0 643 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 LINC00114Q6XXX2 140 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 SHISA6Q6ZSJ9 500 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 PTCHD4Q6ZW05 846 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 TMPRSS11FQ6ZWK6 438 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 KIF18BQ86Y91 864 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 ALDH16A1Q8IZ83 802 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 SLC43A2Q8N370 569 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 SVOPQ8N4V2 548 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 ZNF540Q8NDQ6 660 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 OR5L2Q8NGL0 311 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 UBE2FQ969M7 185 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 FAM46AQ96IP4 442 aaKnown RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 234.8 ms