RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 INIPQ9NRY2 104 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 ASIC5Q9NY37 505 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 TRAV27A0A087WT01 109 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 A6NHS1 94 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 UGT2B10P36537 528 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 HTR3AP46098 478 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 EMX1Q04741 257 aaPredicted RBP14.39□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF750Q32MQ0 723 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 FAM71E1Q6IPT2 247 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 SLC48A1Q6P1K1 146 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 SPERTQ8NA61 448 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 GALNT6Q8NCL4 622 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 BORCS8Q96FH0 119 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 CRISPLD2Q9H0B8 497 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 TBCCD1Q9NVR7 557 aa14.39□□□□□ -0.11
TIMP3-201ENST00000266085 NUFIP1Q9UHK0 495 aaKnown RBP14.39□□□□□ -0.11
TIMP3-201ENST00000266085 TRBV5-4A0A0C4DH59 114 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 SIGLEC6O43699 453 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 CHMP24386 653 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 RBMXP38159 391 aaKnown RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 SOX3P41225 446 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 OR1D5P58170 312 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 OR7A5Q15622 319 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 IL20RBQ6UXL0 311 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 CLEC1AQ8NC01 280 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 AKAP1Q92667 903 aaKnown RBP eCLIP14.38□□□□□ -0.111e-9■□□□□ 10.4
TIMP3-201ENST00000266085 ABCD2Q9UBJ2 740 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF337Q9Y3M9 751 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 AHCTF1Q8WYP5 2266 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF264O43296 627 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 GALR3O60755 368 aaPredicted RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 VASPP50552 380 aaPredicted RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 OR14A16Q8NHC5 309 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 GPR148Q8TDV2 347 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF431Q8TF32 576 aaPredicted RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 RPP25Q9BUL9 199 aaKnown RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 RNF215Q9Y6U7 377 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 CPNE6O95741 557 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 GYPBP06028 91 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 S100A10P60903 97 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 PHC1P78364 1004 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 CHRFAM7AQ494W8 412 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 TMEM102Q8N9M5 508 aaPredicted RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 CCDC120Q96HB5 630 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 CACNG6Q9BXT2 260 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 ENPP5Q9UJA9 477 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 A6NLC8 198 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 SCGB1D2O95969 90 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 ANXA3P12429 323 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 BMP1P13497 986 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 SLC6A12P48065 614 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 FGL2Q14314 439 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 TBCEQ15813 527 aaPredicted RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 RAB11BQ15907 218 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 TMEM64Q6YI46 380 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 TIGD4Q8IY51 512 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 PIAS4Q8N2W9 510 aaPredicted RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 FRMD1Q8N878 549 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 OR5W2Q8NH69 310 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 FNDC8Q8TC99 324 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 CCDC32Q9BV29 185 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 TMEM121BQ9BXQ6 578 aaPredicted RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 OR51E2Q9H255 320 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 YBX2Q9Y2T7 364 aaKnown RBP14.38□□□□□ -0.11
TIMP3-201ENST00000266085 KCNIP3Q9Y2W7 256 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 ZDBF2Q9HCK1 2354 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 LY75O60449 1722 aa14.38□□□□□ -0.11
TIMP3-201ENST00000266085 LRIT2A6NDA9 550 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 SYT7O43581 403 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 S100A9P06702 114 aaKnown RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 CEBPGP53567 150 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF91Q05481 1191 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 NTRK2Q16620 822 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 SMN1Q16637 294 aaKnown RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 TBRG1Q3YBR2 411 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 COX20Q5RI15 118 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 PYHIN1Q6K0P9 492 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 TMEM163Q8TC26 289 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 NINJ1Q92982 152 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 INTS14Q96SY0 518 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 ACTR6Q9GZN1 396 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 GSKIPQ9P0R6 139 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 TRBV4-1A0A0J9YWV2 114 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 CHP2O43745 196 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 SCGNO76038 276 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 OLFM2O95897 454 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 METAP1P53582 386 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 UBE2NP61088 152 aaKnown RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 DCDP81605 110 aaKnown RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 GPR19Q15760 415 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 GARNL3Q5VVW2 1013 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 GPR139Q6DWJ6 353 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 CYHR1Q6ZMK1 362 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 RNF113BQ8IZP6 322 aaKnown RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 C1QTNF3Q9BXJ4 246 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 MEPEQ9NQ76 525 aaPredicted RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 CD300AQ9UGN4 299 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 SHROOM3Q8TF72 1996 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 KIAA1211LQ6NV74 962 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms