RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 GTF2IRD2Q86UP8 949 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 ANKK1Q8NFD2 765 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 OR1N1Q8NGS0 311 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 TRUB1Q8WWH5 349 aaKnown RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 TMEM234Q8WY98 164 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 FCGR1BQ92637 280 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 RNFT2Q96EX2 444 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 SPIN1Q9Y657 262 aaPredicted RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 GMEB1Q9Y692 573 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 CDH10Q9Y6N8 788 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 MED12Q93074 2177 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 DAPL1A0PJW8 107 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 HYAL3O43820 417 aaPredicted RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 TIAF1O95411 115 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 NADKO95544 446 aaPredicted RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 OPN1LWP04000 364 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 CT45A8P0DMV1 189 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 CT45A9P0DMV2 189 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 HK1P19367 917 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 MTNR1AP48039 350 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 MAN2A2P49641 1150 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 CXCR4P61073 352 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 DYNC1I2Q13409 638 aaKnown RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 DGUOKQ16854 277 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 CT45A2Q5DJT8 189 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 PRAMEF20Q5VT98 475 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 WBP2NLQ6ICG8 309 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 HEPHL1Q6MZM0 1159 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 ACSM5Q6NUN0 579 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 OVCH1Q7RTY7 1134 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 SLITRK4Q8IW52 837 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 OR52E2Q8NGJ4 325 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 GGHQ92820 318 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 TNFRSF13CQ96RJ3 184 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 TMEM185BQ9H7F4 350 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 PTGES2Q9H7Z7 377 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 PRMT8Q9NR22 394 aaPredicted RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 ACACAQ13085 2346 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 LNP1A1A4G5 178 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 IRGMA1A4Y4 181 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 H3BML4 177 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 TACR3P29371 465 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 SOX6P35712 828 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 EMP3P54852 163 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 RNF4P78317 190 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 FUT7Q11130 342 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 IL11RAQ14626 422 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 TSTQ16762 297 aaKnown RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 ZNF613Q6PF04 617 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 OR4C15Q8NGM1 316 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 C9orf43Q8TAL5 461 aaPredicted RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 ASB15Q8WXK1 588 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 SECISBP2Q96T21 854 aaKnown RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 ARHGDIGQ99819 225 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 WWTR1Q9GZV5 400 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 PTTG2Q9NZH5 202 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 NXT1Q9UKK6 140 aaKnown RBP8.58□□□□□ -1.04
SSR3-201ENST00000265044 PCDH15Q96QU1 1955 aa8.58□□□□□ -1.04
SSR3-201ENST00000265044 SH3D21A4FU49 640 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 LRRN3E7EW58 273 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 TGFBR3LH3BV60 316 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 PLGP00747 810 aaPredicted RBP8.57□□□□□ -1.04
SSR3-201ENST00000265044 CAPNS1P04632 268 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 GYPBP06028 91 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 PEPDP12955 493 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 ZNF182P17025 639 aaPredicted RBP8.57□□□□□ -1.04
SSR3-201ENST00000265044 ENDOUP21128 410 aaKnown RBP8.57□□□□□ -1.04
SSR3-201ENST00000265044 GUCA1AP43080 201 aaPredicted RBP8.57□□□□□ -1.04
SSR3-201ENST00000265044 SLC37A1P57057 533 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 VBP1P61758 197 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.57□□□□□ -1.04
SSR3-201ENST00000265044 MAPK11Q15759 364 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 RASSF6Q6ZTQ3 369 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 TMPRSS9Q7Z410 1059 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 SLCO6A1Q86UG4 719 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 MORN4Q8NDC4 146 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 PMM1Q92871 262 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 MGLLQ99685 303 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 FUNDC2Q9BWH2 189 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 GABARAPL3Q9BY60 117 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 POLDIP3Q9BY77 421 aaKnown RBP8.57□□□□□ -1.04
SSR3-201ENST00000265044 MARCH7Q9H992 704 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 SERINC1Q9NRX5 453 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 TAS2R10Q9NYW0 307 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 POLR1DQ9Y2S0 133 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 N6AMT1Q9Y5N5 214 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 RNF13O43567 381 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 CHP2O43745 196 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 DPM1O60762 260 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 TMEM44Q2T9K0 475 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 DESI1Q6ICB0 168 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 RPL13AP3Q6NVV1 102 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 C1orf94Q6P1W5 598 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 NPSR1Q6W5P4 371 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 TMPRSS11AQ6ZMR5 421 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 BPHLQ86WA6 291 aaPredicted RBP8.57□□□□□ -1.04
SSR3-201ENST00000265044 RNF113BQ8IZP6 322 aaKnown RBP8.57□□□□□ -1.04
SSR3-201ENST00000265044 FAM181AQ8N9Y4 354 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 SNX33Q8WV41 574 aa8.57□□□□□ -1.04
SSR3-201ENST00000265044 CTHRC1Q96CG8 243 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms