RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 KCT2Q8NC54 265 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 CLRN3Q8NCR9 226 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 FANK1Q8TC84 345 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 HS6ST2Q96MM7 605 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 TEAD3Q99594 435 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 ZDHHC5Q9C0B5 715 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 OR52D1Q9H346 318 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 LHX9Q9NQ69 397 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 CMC2Q9NRP2 79 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 PCDHGA9Q9Y5G4 932 aaKnown RBP11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 CKAP5Q14008 2032 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 PLXNA2O75051 1894 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 KIF26AQ9ULI4 1882 aaPredicted RBP11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 A0A0A6YYD5 115 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF879B4DU55 563 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 MAN2B1O00754 1011 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 ABCD4O14678 606 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 KIAA0355O15063 1070 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 FRS3O43559 492 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 SUSD5O60279 629 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 GMDSO60547 372 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 LILRB5O75023 590 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 AQP8O94778 261 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 EFEMP2O95967 443 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 CD1AP06126 327 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 SBK2P0C263 348 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 GABRA1P14867 456 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 MECP2P51608 486 aaKnown RBP11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 KIAA1024LP59773 190 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 TMEM35AQ53FP2 167 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF805Q5CZA5 627 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF626Q68DY1 528 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 CDK20Q8IZL9 346 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 ASB13Q8WXK3 278 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 LRIG1Q96JA1 1093 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 IL17FQ96PD4 163 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 OR7D2Q96RA2 312 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 SARGQ9BW04 601 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 OR2AG1Q9H205 316 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 IL21Q9HBE4 155 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 HAO2Q9NYQ3 351 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 TAC3Q9UHF0 121 aa11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 GPR55Q9Y2T6 319 aaPredicted RBP11.51□□□□□ -0.57
CHMP2B-201ENST00000263780 POP7O75817 140 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 UCHL1P09936 223 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 NT5EP21589 574 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 TBXA2RP21731 343 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 RAD52P43351 418 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC16A1P53985 500 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC9A5Q14940 896 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 C9orf64Q5T6V5 341 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 LRFN4Q6PJG9 635 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 RNF180Q86T96 592 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 CMTM4Q8IZR5 234 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 BMPERQ8N8U9 685 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 C17orf47Q8NEP4 570 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 TTLQ8NG68 377 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 OR2L2Q8NH16 312 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 TMEM255BQ8WV15 326 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 MRPL48Q96GC5 212 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 C1QTNF6Q9BXI9 259 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 QRSL1Q9H0R6 528 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 AUNIPQ9H7T9 357 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 NRIP3Q9NQ35 241 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 SAGE1Q9NXZ1 904 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 RGS17Q9UGC6 210 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 IL20RAQ9UHF4 553 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 ANAPC1Q9H1A4 1944 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 CDHR4A6H8M9 788 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 DUXAA6NLW8 204 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 RIIAD1A6NNX1 92 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 KPNA3O00505 521 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 BHLHE40O14503 412 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 OGG1O15527 345 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 SDC3O75056 442 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 CLEC3AO75596 197 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 AGR2O95994 175 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 HOXB1P14653 301 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 GLULP15104 373 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 PYCR1P32322 319 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 B2MP61769 119 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 GAS6Q14393 721 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 EIPR1Q53HC9 387 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 CLVS2Q5SYC1 327 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 GSG1LQ6UXU4 331 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 APOOLQ6UXV4 268 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 MCATQ8IVS2 390 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 TCEAL8Q8IYN2 117 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 C2orf73Q8N5S3 287 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 OR4D9Q8NGE8 314 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 THEM6Q8WUY1 208 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 SMPDL3BQ92485 455 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 KLK6Q92876 244 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 KISS1RQ969F8 398 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 MARC2Q969Z3 335 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 PNPLA2Q96AD5 504 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 SEC22CQ9BRL7 303 aa11.5□□□□□ -0.57
CHMP2B-201ENST00000263780 DNTTIP1Q9H147 329 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms