RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 RELTQ969Z4 430 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC41A3Q96GZ6 507 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 PRRC1Q96M27 445 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF347Q96SE7 839 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF559Q9BR84 538 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 BDH2Q9BUT1 245 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 FNDC11Q9BVV2 318 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 ANGPTL4Q9BY76 406 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 COQ10BQ9H8M1 238 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 REEP1Q9H902 201 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 PPP4R1LQ9P1A2 415 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 ABI3Q9P2A4 366 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 FBXL2Q9UKC9 423 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 ACAD8Q9UKU7 415 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC7A7Q9UM01 511 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 WIF1Q9Y5W5 379 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 LYVE1Q9Y5Y7 322 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 A0A1B0GWA3 101 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 SHISA8B8ZZ34 492 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 K7EM74 188 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 K7ENP7 123 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 SOCS2O14508 198 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 EIF4E2O60573 245 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 P04436 131 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 H1F0P07305 194 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 MST1P26927 711 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CD97P48960 835 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 MFAP5Q13361 173 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 FGD3Q5JSP0 725 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OTUD3Q5T2D3 398 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 BROXQ5VW32 411 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 PODNL1Q6PEZ8 512 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 INO80CQ6PI98 192 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ARSKQ6UWY0 536 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 WDR88Q6ZMY6 472 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 LRRC69Q6ZNQ3 347 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF550Q7Z398 422 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 STK32CQ86UX6 486 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CYP4Z1Q86W10 505 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 P3H2Q8IVL5 708 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 APLFQ8IW19 511 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 GALNT4Q8N4A0 578 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 PIK3C3Q8NEB9 887 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OR4C15Q8NGM1 316 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 GPR119Q8TDV5 335 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 NTNG2Q96CW9 530 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CRELD1Q96HD1 420 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 SGCZQ96LD1 299 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 GNRHR2Q96P88 292 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 SMURF2Q9HAU4 748 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 EXOSC3Q9NQT5 275 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 SACM1LQ9NTJ5 587 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 TESQ9UGI8 421 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 TRAPPC13A5PLN9 417 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OR5H15A6NDH6 313 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CASQ2O14958 399 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ADAMDEC1O15204 470 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC25A12O75746 678 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CEACAM4O75871 244 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 HOXB6P17509 224 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CCNA2P20248 432 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ELAVL4P26378 380 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 DNAJA1P31689 397 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 RFC3P40938 356 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CASRP41180 1078 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 LIMS1P48059 325 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 P2RX1P51575 399 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ARG2P78540 354 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 QPRTQ15274 297 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ZSWIM7Q19AV6 140 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OGFRL1Q5TC84 451 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC30A6Q6NXT4 461 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 POMZP3Q6PJE2 187 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF440Q8IYI8 595 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 DND1Q8IYX4 353 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OFCC1Q8IZS5 231 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CBR4Q8N4T8 237 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OR2M3Q8NG83 312 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OR9Q2Q8NGE9 314 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OR5M1Q8NGP8 315 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OR5W2Q8NH69 310 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OR5K1Q8NHB7 308 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF563Q8TA94 476 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC7A13Q8TCU3 470 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 TMEM255BQ8WV15 326 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 OIT3Q8WWZ8 545 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ZCCHC14Q8WYQ9 949 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 EXTL1Q92935 676 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 EME1Q96AY2 570 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 DNAJA3Q96EY1 480 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 DHRS1Q96LJ7 313 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 ALPK1Q96QP1 1244 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 SECISBP2Q96T21 854 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 PRSS27Q9BQR3 290 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 TACO1Q9BSH4 297 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 TRIM2Q9C040 744 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 TMEM27Q9HBJ8 222 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 TIMMDC1Q9NPL8 285 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms