RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 GPR119Q8TDV5 335 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 DUS3LQ96G46 650 aaKnown RBP14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 TTTY12Q9BZ98 90 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 EVA1AQ9H8M9 152 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 NDUFAF4Q9P032 175 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 TESQ9UGI8 421 aaKnown RBP14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 LHX6Q9UPM6 363 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 C15orf41Q9Y2V0 281 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 J3KTA2 159 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 CDC40O60508 579 aaKnown RBP eCLIP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 CBR3O75828 277 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 FABP3P05413 133 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 MST1P26927 711 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 YAP1P46937 504 aaKnown RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 SLC6A8P48029 635 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 ELF3P78545 371 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 PMP22Q01453 160 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 CBFBQ13951 182 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 PLEKHN1Q494U1 663 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 PCSK4Q6UW60 755 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 RANBP3LQ86VV4 465 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 LSRQ86X29 649 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 PAPD5Q8NDF8 572 aaKnown RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 PYDC1Q8WXC3 89 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 C1GALT1C1Q96EU7 318 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 MCHR1Q99705 422 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 CHID1Q9BWS9 393 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 UBQLN3Q9H347 655 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 CTPS2Q9NRF8 586 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 LUZP4Q9P127 313 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 ENPP4Q9Y6X5 453 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 NBEAQ8NFP9 2946 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 ERVH48-1M5A8F1 160 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 FAAHO00519 579 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 FKBP6O75344 327 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 GLSO94925 669 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 DIRAS1O95057 198 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 WISP1O95388 367 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 PGCP20142 388 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 SLC7A1P30825 629 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 IDH2P48735 452 aaKnown RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 QPRTQ15274 297 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 ENTPD8Q5MY95 495 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 ZNF300Q96RE9 604 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 NPAS1Q99742 590 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 ZNF703Q9H7S9 590 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 PTGES2Q9H7Z7 377 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 MED17Q9NVC6 651 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 VDAC3Q9Y277 283 aa14.36□□□□□ -0.11
CCDC90B-201ENST00000260054 CPSF4LA6NMK7 179 aaKnown RBP14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 FAM166BA8MTA8 275 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 FFAR1O14842 300 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 FMO6PO60774 539 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 FUT4P22083 530 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 DSCR4P56555 118 aaPredicted RBP14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 PLGLB1Q02325 96 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 PIN1Q13526 163 aaPredicted RBP14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 OR1Q1Q15612 314 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 HYAL4Q2M3T9 481 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 RNFT1Q5M7Z0 435 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 PIWIL3Q7Z3Z3 882 aaKnown RBP14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 CADM2Q8N3J6 435 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 TMEM251Q8N6I4 163 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 LSMEM1Q8N8F7 131 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 FAM98AQ8NCA5 519 aaKnown RBP14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 ZNF563Q8TA94 476 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 TAAR6Q96RI8 345 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 ZNF559Q9BR84 538 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 SLC25A18Q9H1K4 315 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 TAS2R10Q9NYW0 307 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 A4GNTQ9UNA3 340 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 AP4S1Q9Y587 144 aa14.35□□□□□ -0.11
CCDC90B-201ENST00000260054 TLN1Q9Y490 2541 aaKnown RBP14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 H3BNX3 289 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 PRSS23O95084 383 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 RASAL1O95294 804 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 THY1P04216 161 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 UQCRBP14927 111 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 PRKCAP17252 672 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 TCEA1P23193 301 aaKnown RBP14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 DPP4P27487 766 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 GDF1P27539 372 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 ZNF41P51814 821 aaPredicted RBP14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 SESN3P58005 492 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 COPZ1P61923 177 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 FOXK1P85037 733 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 LY6DQ14210 128 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 PLPPR5Q32ZL2 321 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 Q8NA96 180 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 ADAMTS16Q8TE57 1224 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 PNPLA2Q96AD5 504 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 PRRC1Q96M27 445 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 TRIM2Q9C040 744 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 ARMC1Q9NVT9 282 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 NCKAP5O14513 1909 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 EPG5Q9HCE0 2579 aa14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 SPENQ96T58 3664 aaKnown RBP14.34□□□□□ -0.11
CCDC90B-201ENST00000260054 A0A1B0GWA3 101 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 SHISA8B8ZZ34 492 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 ZIC3O60481 467 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms