RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 OR2L13Q8N349 312 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 ZNF321PQ8N8H1 164 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 ASB12Q8WXK4 309 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 MOAP1Q96BY2 351 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 IFT27Q9BW83 186 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 RACGAP1Q9H0H5 632 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 BCL2L10Q9HD36 194 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 POMT2Q9UKY4 750 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 ATXN7L1Q9ULK2 861 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 DENND4AQ7Z401 1863 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 FAM186AA6NE01 2351 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 ERVH48-1M5A8F1 160 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 ENDOUP21128 410 aaKnown RBP13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 ETV5P41161 510 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 EMDP50402 254 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 ETV1P50549 477 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 LIMK1P53667 647 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 RUNX1T1Q06455 604 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 LPAL2Q16609 132 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 ZNF628Q5EBL2 1059 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 WDR88Q6ZMY6 472 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 GKN2Q86XP6 184 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 CPOQ8IVL8 374 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 OR13C2Q8NGS9 318 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 ANKRD9Q96BM1 317 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 TMEM80Q96HE8 168 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 TEKT2Q9UIF3 430 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 PRRC2CQ9Y520 2896 aaKnown RBP13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 CCDC182A6NF36 153 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 OR2B3O76000 313 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 HOXC4P09017 264 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 TSPAN19P0C672 248 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 PSKH1P11801 424 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 SOX18P35713 384 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 CDH11P55287 796 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 FAM53BQ14153 422 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 PRICKLE4Q2TBC4 344 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 NOXA1Q86UR1 476 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 RANBP3LQ86VV4 465 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 TSLPQ969D9 159 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 CRELD1Q96HD1 420 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 SLC38A2Q96QD8 506 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 CCDC32Q9BV29 185 aa13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 C19orf53Q9UNZ5 99 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-201ENST00000257604 MN1Q10571 1320 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 A0A0B4J293 547 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 PCP4L1A6NKN8 68 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 H3BSH0 61 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 CLDN4O14493 209 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 TNFSF14O43557 240 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 ZNF217O75362 1048 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 CSO75390 466 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 NUDT14O95848 222 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 RNH1P13489 461 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 APEX1P27695 318 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 HTR2AP28223 471 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 ANKK1Q8NFD2 765 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 OR51Q1Q8NH59 317 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 DIO2Q92813 273 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 MESP1Q9BRJ9 268 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 TMED9Q9BVK6 235 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 PIGUQ9H490 435 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 RPL36Q9Y3U8 105 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 A0A1W2PQL4 384 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 E9PQ18 207 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 MAGEB4O15481 346 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 CLUP10909 449 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 BMP7P18075 431 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 CD27P26842 260 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 IFNGR2P38484 337 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 TSFMP43897 325 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 RORCP51449 518 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 TIMM50Q3ZCQ8 353 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 TIGD4Q8IY51 512 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 ZNF619Q8N2I2 560 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 CDRT4Q8N9R6 151 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 ZNF582Q96NG8 517 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 PDE7BQ9NP56 450 aa13.54□□□□□ -0.24
TRAFD1-201ENST00000257604 IGHV3-20A0A0C4DH32 117 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 METTL12A8MUP2 240 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 FAM171A2A8MVW0 826 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 CENPBD1B2RD01 187 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 CBX7O95931 251 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 SMIM10L1P0DMW3 83 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 FOSL2P15408 326 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 PSMA1P25786 263 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 DDOSTP39656 456 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 CCR5P51681 352 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 C1DQ13901 141 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 OTPQ5XKR4 325 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 OR4Q3Q8NH05 313 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 OR4C3Q8NH37 302 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 SLC7A6Q92536 515 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 SNAPC3Q92966 411 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 SMIM10Q96HG1 83 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 SARGQ9BW04 601 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 SRRQ9GZT4 340 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 FBXL4Q9UKA2 621 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms