RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 STARP49675 285 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF551Q7Z340 670 aaPredicted RBP12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 BNIPLQ7Z465 357 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 WDR54Q9H977 334 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 SLC6A20Q9NP91 592 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 A4GALTQ9NPC4 353 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 CTPS2Q9NRF8 586 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 SH3BGRL2Q9UJC5 107 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 K7EQS6 105 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 SASH3O75995 380 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 GALNSP34059 522 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 RGS6P49758 472 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF169Q14929 603 aaPredicted RBP12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF766Q5HY98 468 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 PRICKLE2Q7Z3G6 844 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 TRAPPC6BQ86SZ2 158 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 OR5W2Q8NH69 310 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 SLC41A2Q96JW4 573 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 S1PR5Q9H228 398 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 CLMPQ9H6B4 373 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 SARDHQ9UL12 918 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 AIREO43918 545 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 FZD7O75084 574 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 ACTL6BO94805 426 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 F7P08709 466 aaPredicted RBP12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 LIPCP11150 499 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 DBTP11182 482 aaKnown RBP12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 RPP30P78346 268 aaKnown RBP12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 SPRED1Q7Z699 444 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 KRTCAP2Q8N6L1 136 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 KLHL31Q9H511 634 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 RIMS3Q9UJD0 308 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 C19orf53Q9UNZ5 99 aaPredicted RBP12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 PRKYO43930 277 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 GGT5P36269 586 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 PTGR1Q14914 329 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 CNPY1Q3B7I2 92 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 LETMD1Q6P1Q0 360 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 UBXN10Q96LJ8 280 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 SLC22A4Q9H015 551 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 ADAMTS6Q9UKP5 1117 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 CBLBQ13191 982 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 IL18Q14116 193 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 TMEM176BQ3YBM2 270 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF627Q7L945 461 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 GHDCQ8N2G8 530 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF610Q8N9Z0 462 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 TRIM63Q969Q1 353 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 C11orf24Q96F05 449 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 CIB1Q99828 191 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 ACPTQ9BZG2 426 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 MAN2C1Q9NTJ4 1040 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 FAM118AQ9NWS6 357 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 TEX10Q9NXF1 929 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 ATXN7L1Q9ULK2 861 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 KCNIP3Q9Y2W7 256 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 DLEC1Q9Y238 1755 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 TMED7-TICAM2A0A0A6YYA0 188 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 FAM172BPA6NC97 362 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 SERPINA5P05154 406 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 SH3BP2P78314 561 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 ESCO2Q56NI9 601 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 LRTOMTQ8WZ04 291 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 MRGPRX3Q96LB0 322 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 TMED7Q9Y3B3 224 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 TSC22D4Q9Y3Q8 395 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 SLC22A1O15245 554 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 TLX2O43763 284 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 PLOD3O60568 738 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 DSCR4P56555 118 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 CXADRP78310 365 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 E2F2Q14209 437 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 BTLAQ7Z6A9 289 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 ST7LQ8TDW4 575 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF845Q96IR2 970 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 DPH1Q9BZG8 443 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 FBXO8Q9NRD0 319 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 PLEK2Q9NYT0 353 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 SCP2D1Q9UJQ7 156 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 GRIP1Q9Y3R0 1128 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 SNNO75324 88 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 THBS1P07996 1170 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 SCN1BQ07699 218 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 ZBED5Q49AG3 693 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 MKXQ8IYA7 352 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 NAXEQ8NCW5 288 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 HMGCLL1Q8TB92 370 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 CPNE4Q96A23 557 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 TRMT61AQ96FX7 289 aaKnown RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 OR4K3Q96R72 315 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF768Q9H5H4 540 aaKnown RBP12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 HDGFL3Q9Y3E1 203 aa12.49□□□□□ -0.41
PRPF38A-201ENST00000257181 SCN9AQ15858 1988 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 LOC100130705A0A1B0GUX0 176 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 HSPB2A8KAH6 182 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 TMEM233B4DJY2 109 aa12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 TIMM8AO60220 97 aaPredicted RBP12.48□□□□□ -0.41
PRPF38A-201ENST00000257181 GLCEO94923 617 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms