RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRIM47-201ENST00000254816 KPNA4O00629 521 aaPredicted RBP17.36■□□□□ 0.37
TRIM47-201ENST00000254816 ICOSLGO75144 302 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 RNF4P78317 190 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 MBOAT2Q6ZWT7 520 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 BTLAQ7Z6A9 289 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 CADM2Q8N3J6 435 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 PFN4Q8NHR9 129 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 PLA2G12AQ9BZM1 189 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 TMEM27Q9HBJ8 222 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 UBQLN4Q9NRR5 601 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 IMPAD1Q9NX62 359 aa17.36■□□□□ 0.37
TRIM47-201ENST00000254816 PCNX3Q9H6A9 2034 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 M0R3G1 203 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 OIP5O43482 229 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 FMO6PO60774 539 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 HPGDP15428 266 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 IL12BP29460 328 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 IDUAP35475 653 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 PLCXD2Q0VAA5 305 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 CPEB2Q7Z5Q1 589 aaKnown RBP17.35■□□□□ 0.37
TRIM47-201ENST00000254816 ZNF441Q8N8Z8 693 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 RHOXF1Q8NHV9 184 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 GPR83Q9NYM4 423 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 PSORS1C1Q9UIG5 152 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 A0A1B0GWA3 101 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 OR6C76A6NM76 312 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 SLC22A1O15245 554 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 CD36P16671 472 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 TGFBR2P37173 567 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 IFNGR2P38484 337 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 CDC42P60953 191 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 COX10Q12887 443 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 FAM198BQ6UWH4 519 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 CD300LDQ6UXZ3 194 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 TMCO5AQ8N6Q1 288 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 PHOSPHO1Q8TCT1 267 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 TRUB1Q8WWH5 349 aaKnown RBP17.35■□□□□ 0.37
TRIM47-201ENST00000254816 OMA1Q96E52 524 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 RTN4RQ9BZR6 473 aa17.35■□□□□ 0.37
TRIM47-201ENST00000254816 POLR2J2Q9GZM3 115 aaKnown RBP17.35■□□□□ 0.37
TRIM47-201ENST00000254816 A0A0B4J2E0 115 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 A0A1B0GX12 115 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 C17orf51A8MQB3 221 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 B4E171 279 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 SCDO00767 359 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 RFPL3O75679 317 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 GABRB1P18505 474 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 ABCD3P28288 659 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 TSPAN7P41732 249 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 PSMD7P51665 324 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 TSPAN31Q12999 210 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 ATP1A4Q13733 1029 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 TMEM205Q6UW68 189 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 ZNF550Q7Z398 422 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 IGFN1Q86VF2 1251 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 GGHQ92820 318 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 SH3YL1Q96HL8 342 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-201ENST00000254816 SEMA4CQ9C0C4 833 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 PARD6AQ9NPB6 346 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 C20orf141Q9NUB4 165 aa17.34■□□□□ 0.37
TRIM47-201ENST00000254816 AKAP7Q9P0M2 348 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-201ENST00000254816 MRTO4Q9UKD2 239 aaKnown RBP17.34■□□□□ 0.37
TRIM47-201ENST00000254816 SYNDIG1LA6NDD5 238 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 PRR33A8MZF0 331 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 TSPAN2O60636 221 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 NADKO95544 446 aaPredicted RBP17.33■□□□□ 0.37
TRIM47-201ENST00000254816 FUT1P19526 365 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 FNDC7Q5VTL7 733 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 ZNF613Q6PF04 617 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 CBLN3Q6UW01 205 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 HSDL2Q6YN16 418 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 RAB11FIP2Q7L804 512 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 CMIPQ8IY22 773 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 DEPDC4Q8N2C3 294 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 ZNF527Q8NB42 609 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 TMEM239Q8WW34 195 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 IL4I1Q96RQ9 567 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 LPAR4Q99677 370 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 HOXD1Q9GZZ0 328 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 ATP13A2Q9NQ11 1180 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 CARD8Q9Y2G2 431 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 PMF1-BGLAPU3KQ54 211 aa17.33■□□□□ 0.37
TRIM47-201ENST00000254816 TRBV11-1A0A0K0K1C0 115 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 CDC42EP2O14613 210 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 GNB5O14775 395 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 TO15178 435 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 GMFGO60234 142 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF354AO60765 605 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-201ENST00000254816 GSTM3P21266 225 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 LIPAP38571 399 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 ITGADQ13349 1161 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 ISXQ2M1V0 245 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 DCAF12Q5T6F0 453 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 UBE2UQ5VVX9 321 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 SLX4IPQ5VYV7 408 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 KIRREL2Q6UWL6 708 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 PTCHD4Q6ZW05 846 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 SLC34A3Q8N130 599 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 POGLUT1Q8NBL1 392 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms