RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 TTYH1Q9H313 450 aaPredicted RBP11.13□□□□□ -0.63
USHBP1-201ENST00000252597 KLK11Q9UBX7 282 aa11.13□□□□□ -0.63
USHBP1-201ENST00000252597 A0A1W2PP55 124 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 OR2W5A6NFC9 320 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 L7N2F9 121 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 FLRT2O43155 660 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 TFP02787 698 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 ADRB1P08588 477 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 NAT1P18440 290 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 LAG3P18627 525 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 ANXA7P20073 488 aaKnown RBP11.12□□□□□ -0.63
USHBP1-201ENST00000252597 MAKP20794 623 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 F8A1P23610 371 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 KCNAB1Q14722 419 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 HBMQ6B0K9 141 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 ZNF620Q6ZNG0 422 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 SMPDL3BQ92485 455 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 WDR89Q96FK6 387 aaPredicted RBP11.12□□□□□ -0.63
USHBP1-201ENST00000252597 TNFRSF13CQ96RJ3 184 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 FKRPQ9H9S5 495 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 SIDT1Q9NXL6 827 aaKnown RBP11.12□□□□□ -0.63
USHBP1-201ENST00000252597 UBQLN2Q9UHD9 624 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 HEATR5BQ9P2D3 2071 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 A0A0G2JPF8 293 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 SERTM1A2A2V5 107 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 HNRNPCL3B7ZW38 293 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 EMC8O43402 210 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 DOK2O60496 412 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 GMDSO60547 372 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 STX11O75558 287 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 PLATP00750 562 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 IFNA7P01567 189 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 HNRNPCL4P0DMR1 293 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 LIPCP11150 499 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 AK4P27144 223 aaPredicted RBP11.12□□□□□ -0.63
USHBP1-201ENST00000252597 ACADLP28330 430 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 GDNFP39905 211 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 OMPP47874 163 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 SELENOPP49908 381 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 TMEM31Q5JXX7 168 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 SSX6Q7RTT6 188 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 OR52B4Q8NGK2 314 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 OR14C36Q8NHC7 312 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 PINK1Q9BXM7 581 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 SLC6A17Q9H1V8 727 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 WDR26Q9H7D7 661 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 FGF20Q9NP95 211 aaPredicted RBP11.12□□□□□ -0.63
USHBP1-201ENST00000252597 IKZF2Q9UKS7 526 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 ARRDC5A6NEK1 342 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 ZNF888P0CJ79 500 aaPredicted RBP11.12□□□□□ -0.63
USHBP1-201ENST00000252597 ATF1P18846 271 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 HTR1FP30939 366 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 HSF2Q03933 536 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 RGS1Q08116 209 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 SGCGQ13326 291 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 EOGTQ5NDL2 527 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 AADACL4Q5VUY2 407 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 FCRLAQ7L513 359 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 DUSP18Q8NEJ0 188 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 OR7G2Q8NG99 324 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 LCN9Q8WX39 176 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 THAP4Q8WY91 577 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 ELP4Q96EB1 424 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 LRRC3BQ96PB8 259 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 RANBP3Q9H6Z4 567 aaPredicted RBP11.12□□□□□ -0.63
USHBP1-201ENST00000252597 KCNN3Q9UGI6 736 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 SCML1Q9UN30 329 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 FKBP7Q9Y680 259 aa11.12□□□□□ -0.63
USHBP1-201ENST00000252597 DOCK9Q9BZ29 2069 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 TRABD2BA6NFA1 517 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 E9PQ18 207 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 MAN2B1O00754 1011 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 RAF1P04049 648 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 CEBPBP17676 345 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 ATP5A1P25705 553 aaKnown RBP11.11□□□□□ -0.63
USHBP1-201ENST00000252597 SLC6A1P30531 599 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 BMP8BP34820 402 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 GABRA3P34903 492 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 CTNNB1P35222 781 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 MAPK14Q16539 360 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 DUSP5Q16690 384 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 NDUFAF6Q330K2 333 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 SFRP5Q5T4F7 317 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 MRPL2Q5T653 305 aaKnown RBP11.11□□□□□ -0.63
USHBP1-201ENST00000252597 YOD1Q5VVQ6 348 aaPredicted RBP11.11□□□□□ -0.63
USHBP1-201ENST00000252597 APOOLQ6UXV4 268 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 ERN2Q76MJ5 926 aaKnown RBP11.11□□□□□ -0.63
USHBP1-201ENST00000252597 MEPCEQ7L2J0 689 aaKnown RBP11.11□□□□□ -0.63
USHBP1-201ENST00000252597 BMP8AQ7Z5Y6 402 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 OR56A1Q8NGH5 318 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 OR5K2Q8NHB8 316 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 NXPE2Q96DL1 559 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 ZNF514Q96K75 400 aaPredicted RBP11.11□□□□□ -0.63
USHBP1-201ENST00000252597 DHRS9Q9BPW9 319 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 CDV3Q9UKY7 258 aaKnown RBP11.11□□□□□ -0.63
USHBP1-201ENST00000252597 ICKQ9UPZ9 632 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 ADAM18Q9Y3Q7 739 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 MAS1P04201 325 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 CPMP14384 443 aa11.11□□□□□ -0.63
USHBP1-201ENST00000252597 PVRP15151 417 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms