RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 RPS6KB2Q9UBS0 482 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 IL33O95760 270 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 CSTAP01040 98 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 IGHA1P01876 353 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 BMP4P12644 408 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 FBLP22087 321 aaKnown RBP21.07■□□□□ 0.96
HOXD9-201ENST00000249499 SOX3P41225 446 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 OR1D4P47884 311 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 DCAF7P61962 342 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 PAQR6Q6TCH4 344 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 C11orf74Q86VG3 221 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 FAM71CQ8NEG0 241 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 CDADC1Q9BWV3 514 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 HINT3Q9NQE9 182 aaKnown RBP21.07■□□□□ 0.96
HOXD9-201ENST00000249499 CMC2Q9NRP2 79 aa21.07■□□□□ 0.96
HOXD9-201ENST00000249499 A0A1B0GX78 115 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 FRG2CA6NGY1 282 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 TAF4O00268 1085 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 ADAM11O75078 769 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 IGKV3-11P04433 115 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 SAGP10523 405 aaPredicted RBP21.06■□□□□ 0.96
HOXD9-201ENST00000249499 FOLR1P15328 257 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 CRYBB2P43320 205 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 RNF144AP50876 292 aaPredicted RBP21.06■□□□□ 0.96
HOXD9-201ENST00000249499 TPBGQ13641 420 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 INAQ16352 499 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 CACTIN-AS1Q8N1I8 211 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 LRFN5Q96NI6 719 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 YIPF2Q9BWQ6 316 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 UBQLN4Q9NRR5 601 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 PNO1Q9NRX1 252 aaKnown RBP21.06■□□□□ 0.96
HOXD9-201ENST00000249499 SUSD2Q9UGT4 822 aa21.06■□□□□ 0.96
HOXD9-201ENST00000249499 TCRBV16S1A1N1A0A5B0 115 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 TNFRSF10AO00220 468 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 CD40LGP29965 261 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 SLC1A3P43003 542 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 ACSM1Q08AH1 577 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 RTL4Q6ZR62 310 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 LAPTM4BQ86VI4 370 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 Q8N9G6 341 aaPredicted RBP21.05■□□□□ 0.96
HOXD9-201ENST00000249499 CHPT1Q8WUD6 406 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 EXOSC3Q9NQT5 275 aaKnown RBP21.05■□□□□ 0.96
HOXD9-201ENST00000249499 TBCCD1Q9NVR7 557 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 SSR3Q9UNL2 185 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 CLCA3PQ9Y6N3 262 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 KPNA4O00629 521 aaPredicted RBP21.05■□□□□ 0.96
HOXD9-201ENST00000249499 IGF2P01344 180 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 LIMS3P0CW19 117 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 LIMS4P0CW20 117 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 EPHA8P29322 1005 aaPredicted RBP21.05■□□□□ 0.96
HOXD9-201ENST00000249499 RGS21Q2M5E4 152 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 SOWAHCQ53LP3 525 aaPredicted RBP21.05■□□□□ 0.96
HOXD9-201ENST00000249499 CPOQ8IVL8 374 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 ZNF485Q8NCK3 441 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 OR13C2Q8NGS9 318 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 OR4C3Q8NH37 302 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 OR52N1Q8NH53 320 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 ZNF501Q96CX3 271 aaPredicted RBP21.05■□□□□ 0.96
HOXD9-201ENST00000249499 ARHGAP9Q9BRR9 750 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 SLC19A3Q9BZV2 496 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 MKKSQ9NPJ1 570 aaPredicted RBP21.05■□□□□ 0.96
HOXD9-201ENST00000249499 DHCR7Q9UBM7 475 aaKnown RBP21.05■□□□□ 0.96
HOXD9-201ENST00000249499 ICAM5Q9UMF0 924 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 SRPK3Q9UPE1 567 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 PEX16Q9Y5Y5 336 aa21.05■□□□□ 0.96
HOXD9-201ENST00000249499 A0A075B6Q4 140 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 ZNF670-ZNF695F2Z2N8 137 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 RFPL3O75679 317 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 PPM1BO75688 479 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 SULT1C4O75897 302 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 SLC9A3P48764 834 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 PPP5CP53041 499 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 COPZ1P61923 177 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 FOXK2Q01167 660 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 FNDC7Q5VTL7 733 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 TMEM71Q6P5X7 295 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 KIRREL2Q6UWL6 708 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 KANSL1Q7Z3B3 1105 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 WDR5BQ86VZ2 330 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 OR14A16Q8NHC5 309 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 DAZLQ92904 295 aaKnown RBP21.04■□□□□ 0.96
HOXD9-201ENST00000249499 LCORQ96JN0 433 aaPredicted RBP21.04■□□□□ 0.96
HOXD9-201ENST00000249499 IL20RAQ9UHF4 553 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 CARD8Q9Y2G2 431 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 PCDH15Q96QU1 1955 aa21.04■□□□□ 0.96
HOXD9-201ENST00000249499 A0A087WUJ7 227 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 DDAH2O95865 285 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 TSPAN19P0C672 248 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 ANKRD34CP0C6C1 535 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 SLC6A6P31641 620 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 S100A5P33763 92 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 RPS3AP61247 264 aaKnown RBP21.03■□□□□ 0.96
HOXD9-201ENST00000249499 NNATQ16517 81 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 SNAP47Q5SQN1 464 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 NIPAL3Q6P499 406 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 MEPCEQ7L2J0 689 aaKnown RBP21.03■□□□□ 0.96
HOXD9-201ENST00000249499 OAFQ86UD1 273 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 SLC2A12Q8TD20 617 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 ZNF721Q8TF20 911 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms