RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MUTYHQ9UIF7 546 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 FBXL4Q9UKA2 621 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 CBLCQ9ULV8 474 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 PCDH15Q96QU1 1955 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 C2orf92A0A1B0GVN3 265 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 H3BUI4 141 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 TPPPO94811 219 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 CPEP16870 476 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.58□□□□□ -0.08
LRFN1-201ENST00000248668 DEFB133Q30KQ1 61 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 CCDC190Q86UF4 302 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 GATSQ8NAP1 163 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 RIT1Q92963 219 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 MOV10Q9HCE1 1003 aaKnown RBP14.58□□□□□ -0.08
LRFN1-201ENST00000248668 SPTBN2O15020 2390 aa14.58□□□□□ -0.08
LRFN1-201ENST00000248668 CD8B2A6NJW9 211 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 LRRN3E7EW58 273 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 BRINP1O60477 761 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 WNT1P04628 370 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 IFNA16P05015 189 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 MSL3P1P0C860 447 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 CD8BP10966 210 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 BMP7P18075 431 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 KCNAB1Q14722 419 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 GXYLT1Q4G148 440 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 SLC25A30Q5SVS4 291 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 OR52L1Q8NGH7 329 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 ASB15Q8WXK1 588 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 BPIFA2Q96DR5 249 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 MMABQ96EY8 250 aaPredicted RBP14.57□□□□□ -0.08
LRFN1-201ENST00000248668 TMEM246Q9BRR3 403 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 LRRN3Q9H3W5 708 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 ANKRD19PQ9H560 264 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 LMAN1LQ9HAT1 526 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 ABCB9Q9NP78 766 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 MALT1Q9UDY8 824 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 CLCA3PQ9Y6N3 262 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 A3GALT2U3KPV4 340 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 LRP4O75096 1905 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 SAGE2PA6NJ88 616 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 OR5K4A6NMS3 321 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 THBS1P07996 1170 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 ZNF181Q2M3W8 571 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 TMPRSS11AQ6ZMR5 421 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 ARL14Q8N4G2 192 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 LMF1Q96S06 567 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 SLC38A3Q99624 504 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 MEPEQ9NQ76 525 aaPredicted RBP14.57□□□□□ -0.08
LRFN1-201ENST00000248668 FLRT3Q9NZU0 649 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 CRNNQ9UBG3 495 aaPredicted RBP14.57□□□□□ -0.08
LRFN1-201ENST00000248668 TNFRSF10DQ9UBN6 386 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 A0A087WV62 115 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 NOS3P29474 1203 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 MRGPREQ86SM8 312 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 UBE2J2Q8N2K1 259 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 NR4A3Q92570 626 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 RFKQ969G6 155 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 TTYH2Q9BSA4 534 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 FOLH1BQ9HBA9 442 aa14.57□□□□□ -0.08
LRFN1-201ENST00000248668 FGF20Q9NP95 211 aaPredicted RBP14.57□□□□□ -0.08
LRFN1-201ENST00000248668 A8MUA0 341 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 SLC30A4O14863 429 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 GMFGO60234 142 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 UBXN2BQ14CS0 331 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 TMEM99Q8N816 258 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 OR10H4Q8NGA5 316 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 HS6ST2Q96MM7 605 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 KCTD7Q96MP8 289 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 ERVK-19Q9WJR5 959 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 TMEM184BQ9Y519 407 aaPredicted RBP14.56□□□□□ -0.08
LRFN1-201ENST00000248668 A0A1B0GWA3 101 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 C12orf71A8MTZ7 269 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 FOXS1O43638 330 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 SERPINI2O75830 405 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 PAICSP22234 425 aaKnown RBP14.56□□□□□ -0.08
LRFN1-201ENST00000248668 TUBA3EQ6PEY2 450 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 CCBE1Q6UXH8 406 aaPredicted RBP14.56□□□□□ -0.08
LRFN1-201ENST00000248668 OR51L1Q8NGJ5 315 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 DACT3Q96B18 629 aaPredicted RBP14.56□□□□□ -0.08
LRFN1-201ENST00000248668 DEPDC7Q96QD5 511 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 TMEM27Q9HBJ8 222 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 EXOSC1Q9Y3B2 195 aaKnown RBP14.56□□□□□ -0.08
LRFN1-201ENST00000248668 FRYLO94915 3013 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 HEATR5AQ86XA9 2040 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 A0A1W2PQL4 384 aaPredicted RBP14.56□□□□□ -0.08
LRFN1-201ENST00000248668 PPP1R3DO95685 299 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 SLC35E2P0CK97 266 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 RPS4Y1P22090 263 aaKnown RBP14.56□□□□□ -0.08
LRFN1-201ENST00000248668 PRAMEF17Q5VTA0 474 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 GDPD3Q7L5L3 318 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 RELTQ969Z4 430 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 CTHRC1Q96CG8 243 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 STACQ99469 402 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 ORAI3Q9BRQ5 295 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 ARHGAP9Q9BRR9 750 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 TWSG1Q9GZX9 223 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 LRIT1Q9P2V4 623 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 COMMD3Q9UBI1 195 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 ZNF223Q9UK11 482 aaPredicted RBP14.56□□□□□ -0.08
LRFN1-201ENST00000248668 MED31Q9Y3C7 131 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms