RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 C22orf42Q6IC83 251 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 MEPCEQ7L2J0 689 aaKnown RBP13.96□□□□□ -0.17
DDX49-201ENST00000247003 SLC22A16Q86VW1 577 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 LYSMD2Q8IV50 215 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 CARFQ8N187 725 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 RCBTB1Q8NDN9 531 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 OR7G1Q8NGA0 311 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 OR51G2Q8NGK0 314 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 HLA-CQ95604 372 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 TMEM203Q969S6 136 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 RERGLQ9H628 205 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 SP140LQ9H930 580 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 MKKSQ9NPJ1 570 aaPredicted RBP13.96□□□□□ -0.17
DDX49-201ENST00000247003 ERVK13-1Q9NX77 482 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 FLRT3Q9NZU0 649 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 LRIT1Q9P2V4 623 aa13.96□□□□□ -0.17
DDX49-201ENST00000247003 THADAQ6YHU6 1953 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 IQCMA0A1B0GVH7 501 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 C17orf105B2RV13 164 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 DUX1O43812 170 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 PIAS2O75928 621 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 RPS25P62851 125 aaKnown RBP13.95□□□□□ -0.18
DDX49-201ENST00000247003 PLAURQ03405 335 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 MXD1Q05195 221 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 DNASE1L3Q13609 305 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 KLHL12Q53G59 568 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 SLC35F1Q5T1Q4 408 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 NKAIN2Q5VXU1 208 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 PTCRAQ6ISU1 281 aaPredicted RBP13.95□□□□□ -0.18
DDX49-201ENST00000247003 ARHGAP11AQ6P4F7 1023 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 QSOX2Q6ZRP7 698 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 ZNF440Q8IYI8 595 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 SPEM1Q8N4L4 309 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 BCORP1Q8N888 145 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 ZNF527Q8NB42 609 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 TM9SF4Q92544 642 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 AP3S1Q92572 193 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 SLC25A46Q96AG3 418 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 TRMT61AQ96FX7 289 aaKnown RBP13.95□□□□□ -0.18
DDX49-201ENST00000247003 COQ7Q99807 217 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 CCDC32Q9BV29 185 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 SPRTNQ9H040 489 aaPredicted RBP13.95□□□□□ -0.18
DDX49-201ENST00000247003 MEPEQ9NQ76 525 aaPredicted RBP13.95□□□□□ -0.18
DDX49-201ENST00000247003 CUTCQ9NTM9 273 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 WNT16Q9UBV4 365 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 SLC35A3Q9Y2D2 325 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 MMACHCQ9Y4U1 282 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 PCDHGB6Q9Y5F9 930 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 RNF215Q9Y6U7 377 aa13.95□□□□□ -0.18
DDX49-201ENST00000247003 TRAV27A0A087WT01 109 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 EFCAB7A8K855 629 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 PLD2O14939 933 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 POLR1CO15160 346 aaPredicted RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 ATXN8OSP0DMR3 200 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 CT45A8P0DMV1 189 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 CT45A9P0DMV2 189 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 HPGDP15428 266 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 ACAA2P42765 397 aaKnown RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 SLC16A1P53985 500 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 FXYD6P3P58550 94 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 FOXK2Q01167 660 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 CRYZQ08257 329 aaKnown RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 ACSM1Q08AH1 577 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.94□□□□□ -0.18
DDX49-201ENST00000247003 ZNF791Q3KP31 576 aaPredicted RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 CT45A2Q5DJT8 189 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 RTL4Q6ZR62 310 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 TTLL10Q6ZVT0 673 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 CCDC190Q86UF4 302 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 PLXDC1Q8IUK5 500 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 SIX5Q8N196 739 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 ACBD7Q8N6N7 88 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 POC5Q8NA72 575 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 C7orf57Q8NEG2 295 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 OR51A7Q8NH64 312 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 MVB12AQ96EY5 273 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 CPNE5Q9HCH3 593 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 CAB39Q9Y376 341 aaPredicted RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 MAU2Q9Y6X3 613 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 SERINC4A6NH21 518 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 HLA-DPB1P04440 258 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 HK1P19367 917 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 ALAS2P22557 587 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 SLC9A3P48764 834 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 CSNK1EP49674 416 aaKnown RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 AFF3P51826 1226 aaKnown RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 HSD11B2P80365 405 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 HNRNPA0Q13151 305 aaKnown RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 WDR45BQ5MNZ6 344 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 STEAP3Q658P3 488 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 GPR135Q8IZ08 494 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 SIRT6Q8N6T7 355 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 DNAJA4Q8WW22 397 aaPredicted RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 SPRYD4Q8WW59 207 aaPredicted RBP13.94□□□□□ -0.18
DDX49-201ENST00000247003 OIT3Q8WWZ8 545 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 OR1F2PQ96R84 312 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 MED18Q9BUE0 208 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 ZNF426Q9BUY5 554 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 HOXD1Q9GZZ0 328 aa13.94□□□□□ -0.18
DDX49-201ENST00000247003 TPK1Q9H3S4 243 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms