RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 PRSS27Q9BQR3 290 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 MMP25Q9NPA2 562 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 STMND1H3BQB6 276 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 SOCS6O14544 535 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 ADAM11O75078 769 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 OR2J2O76002 312 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 ATP6V1B1P15313 513 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 FPR3P25089 353 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 ITPKBP27987 946 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 DLSTP36957 453 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 STAT5AP42229 794 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 RBM34P42696 430 aaKnown RBP17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 CDK5R2Q13319 367 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 DNASE1L3Q13609 305 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 WBP2NLQ6ICG8 309 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 NUP54Q7Z3B4 507 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 SLC15A4Q8N697 577 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 POGLUT1Q8NBL1 392 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 NACC2Q96BF6 587 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 FAM117AQ9C073 453 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 ZNF160Q9HCG1 818 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 RASSF1Q9NS23 344 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 CNIH4Q9P003 139 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 TMEM5Q9Y2B1 443 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 KNTC1P50748 2209 aa17.16■□□□□ 0.34
TNFSF9-201ENST00000245817 A0A087WXM4 84 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 DCDC2BA2VCK2 349 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 TMEM200CA6NKL6 621 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 ZAR1LA6NP61 321 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 E9PQ18 207 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 SCO2O43819 266 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 RAD1O60671 282 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 ANGPTL1O95841 491 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 FBXW4P57775 412 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 CTU2Q2VPK5 515 aaKnown RBP17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 P3H2Q8IVL5 708 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 CNIH3Q8TBE1 160 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 TEX47Q8TBZ9 253 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 TTC9Q92623 222 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 SH3YL1Q96HL8 342 aaPredicted RBP17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 DLL3Q9NYJ7 618 aa17.15■□□□□ 0.34
TNFSF9-201ENST00000245817 PIP5K1CO60331 668 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 FADS1O60427 444 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 MPZL2O60487 215 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 OR6B1O95007 311 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 LYPD3O95274 346 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 NADKO95544 446 aaPredicted RBP17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 NTN1O95631 604 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 NUDT14O95848 222 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 IFI30P13284 250 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 RBMS1P29558 406 aaKnown RBP17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 GPR4P46093 362 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 MAD2L1BPQ15013 274 aaPredicted RBP17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 TMEM236Q5W0B7 351 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 CBLN3Q6UW01 205 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 CASP12Q6UXS9 341 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 RASSF6Q6ZTQ3 369 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 BPIFB6Q8NFQ5 453 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 FBLIM1Q8WUP2 373 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 GPA33Q99795 319 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 TEX12Q9BXU0 123 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 SCN3BQ9NY72 215 aa17.14■□□□□ 0.33
TNFSF9-201ENST00000245817 A0A1W2PQ72 361 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 KPNA4O00629 521 aaPredicted RBP17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 PNMTP11086 282 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 PGCP20142 388 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 PTNP21246 168 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 GABREP78334 506 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 ZNF117Q03924 483 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 PRKCDQ05655 676 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 WDR88Q6ZMY6 472 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 PPP1R32Q7Z5V6 425 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 MEX3DQ86XN8 651 aaKnown RBP17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 ENTHD1Q8IYW4 607 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 PFN4Q8NHR9 129 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 CCNL2Q96S94 520 aaPredicted RBP17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 TUBA8Q9NY65 449 aaPredicted RBP17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 RNF6Q9Y252 685 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 ELOA3DA6NLF2 546 aaPredicted RBP17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 HPP00738 406 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 CCDC159P0C7I6 412 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 SMIM18P0DKX4 95 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 SMSP52788 366 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 CXCR4P61073 352 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 CSNK2BP67870 215 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 CBFBQ13951 182 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 ELOA3BQ3SY89 546 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 PTCHD4Q6ZW05 846 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 CCDC71Q8IV32 467 aaPredicted RBP17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 ELOA3Q8NG57 546 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 OSTF1Q92882 214 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 BPIFA2Q96DR5 249 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 NODALQ96S42 347 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 RASL10BQ96S79 203 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 YARS2Q9Y2Z4 477 aaKnown RBP17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 TPRKBQ9Y3C4 175 aa17.13■□□□□ 0.33
TNFSF9-201ENST00000245817 A0A087WUJ7 227 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 UNC119BA6NIH7 251 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 SLC1A7O00341 560 aa17.12■□□□□ 0.33
TNFSF9-201ENST00000245817 OIP5O43482 229 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms