RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CADM2Q8N3J6 435 aa17.01■□□□□ 0.31
HOXC11-201ENST00000243082 LNX2Q8N448 690 aa17.01■□□□□ 0.31
HOXC11-201ENST00000243082 OR52L1Q8NGH7 329 aa17.01■□□□□ 0.31
HOXC11-201ENST00000243082 SLC2A12Q8TD20 617 aa17.01■□□□□ 0.31
HOXC11-201ENST00000243082 SAP25Q8TEE9 199 aa17.01■□□□□ 0.31
HOXC11-201ENST00000243082 RFKQ969G6 155 aa17.01■□□□□ 0.31
HOXC11-201ENST00000243082 ADAMTS20P59510 1910 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 CLDN25C9JDP6 229 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 SAGP10523 405 aaPredicted RBP17■□□□□ 0.31
HOXC11-201ENST00000243082 BMP7P18075 431 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 RORAP35398 523 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 C1DQ13901 141 aaKnown RBP17■□□□□ 0.31
HOXC11-201ENST00000243082 ELAVL1Q15717 326 aaKnown RBP17■□□□□ 0.31
HOXC11-201ENST00000243082 TIMM50Q3ZCQ8 353 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 PERM1Q5SV97 790 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 ARHGAP40Q5TG30 622 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 RPL13AP3Q6NVV1 102 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 GUSBP11Q6P575 273 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 SHFQ7M4L6 423 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 CPOQ8IVL8 374 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 KBTBD8Q8NFY9 601 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 OR4C6Q8NH72 309 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 MAFAQ8NHW3 353 aaPredicted RBP17■□□□□ 0.31
HOXC11-201ENST00000243082 ADIPOR1Q96A54 375 aa17■□□□□ 0.31
HOXC11-201ENST00000243082 PRMT8Q9NR22 394 aaPredicted RBP17■□□□□ 0.31
HOXC11-201ENST00000243082 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.99■□□□□ 0.31
HOXC11-201ENST00000243082 TOX3O15405 576 aaPredicted RBP16.99■□□□□ 0.31
HOXC11-201ENST00000243082 DYRK3O43781 588 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 IL33O95760 270 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 MYL12AP19105 171 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 HTR1FP30939 366 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 SQSTM1Q13501 440 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 FNDC7Q5VTL7 733 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 SMARCD3Q6STE5 483 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 LAPTM4BQ86VI4 370 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 PALMDQ9NP74 551 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 PI4KAP42356 2102 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 TNRC6BQ9UPQ9 1833 aaKnown RBP16.99■□□□□ 0.31
HOXC11-201ENST00000243082 TRAV27A0A087WT01 109 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 TMEM129A0AVI4 362 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 CPED1A4D0V7 1026 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 METTL15A6NJ78 407 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 FAM183AA6NL82 134 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 LIMS3P0CW19 117 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 LIMS4P0CW20 117 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 FHL1Q13642 323 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 ZNF846Q147U1 533 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 NR0B2Q15466 257 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 NSDHLQ15738 373 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 HLA-BQ31612 363 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 PLK5Q496M5 336 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 CXXC5Q7LFL8 322 aaKnown RBP16.99■□□□□ 0.31
HOXC11-201ENST00000243082 BTLAQ7Z6A9 289 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 PRSS58Q8IYP2 241 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 FAM71CQ8NEG0 241 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 OR51A7Q8NH64 312 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 MCFD2Q8NI22 146 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 FNDC8Q8TC99 324 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 LCORQ96JN0 433 aaPredicted RBP16.99■□□□□ 0.31
HOXC11-201ENST00000243082 NUDT9Q9BW91 350 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 VN1R1Q9GZP7 353 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 HMG20AQ9NP66 347 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 UBQLN4Q9NRR5 601 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 NDUFB11Q9NX14 153 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 SUSD2Q9UGT4 822 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 EXOGQ9Y2C4 368 aaKnown RBP16.99■□□□□ 0.31
HOXC11-201ENST00000243082 SLC35A3Q9Y2D2 325 aa16.99■□□□□ 0.31
HOXC11-201ENST00000243082 EXOSC1Q9Y3B2 195 aaKnown RBP16.99■□□□□ 0.31
HOXC11-201ENST00000243082 NUP210LQ5VU65 1888 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 FER1L5A0AVI2 2057 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 FRG2CA6NGY1 282 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 WWP2O00308 870 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 SOCS6O14544 535 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 SIGLEC6O43699 453 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 HCN1O60741 890 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 ADH7P40394 386 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 CRYBB2P43320 205 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 WNT4P56705 351 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 ZXDAP98168 799 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 CD226Q15762 336 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 ZNF404Q494X3 552 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 SLC35F1Q5T1Q4 408 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 OR2G6Q5TZ20 316 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 C16orf87Q6PH81 154 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 IGFN1Q86VF2 1251 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 PHC2Q8IXK0 858 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 MFSD4AQ8N468 514 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 OR4F15Q8NGB8 312 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 S100ZQ8WXG8 99 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 RNF31Q96EP0 1072 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 CDADC1Q9BWV3 514 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 HOXD1Q9GZZ0 328 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 FN3KQ9H479 309 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 RPS6KB2Q9UBS0 482 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 CFL2Q9Y281 166 aa16.98■□□□□ 0.31
HOXC11-201ENST00000243082 A0A1W2PQM1 296 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 SYNDIG1LA6NDD5 238 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 BMP4P12644 408 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 FOXK2Q01167 660 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms