RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MPIP34949 423 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 EIF2B2P49770 351 aaKnown RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 RORCP51449 518 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 RPS16P62249 146 aaKnown RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 BNC1Q01954 994 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 FUT5Q11128 374 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 RAB40BQ12829 278 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SGCGQ13326 291 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 GPM6BQ13491 265 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 KRT33BQ14525 404 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 GINS1Q14691 196 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 TRAM2Q15035 370 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SYT14P1Q58G82 188 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 FAM180BQ6P0A1 224 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 WASH2PQ6VEQ5 465 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 PPP1R32Q7Z5V6 425 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 RBM45Q8IUH3 476 aaKnown RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SNX29P2Q8IUI4 249 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SLC34A3Q8N130 599 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 C12orf76Q8N812 135 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 TCEANCQ8N8B7 351 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 AMER3Q8N944 861 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 ACOT4Q8N9L9 421 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 OR2L3Q8NG85 312 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 OR52E1Q8NGJ3 308 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 OR5D16Q8NGK9 328 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 OR6T1Q8NGN1 323 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 DVL3Q92997 716 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 EFHD2Q96C19 240 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 CNRIP1Q96F85 164 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SNX22Q96L94 193 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 CEP19Q96LK0 163 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 CDCA3Q99618 268 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SLC30A2Q9BRI3 323 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 ROGDIQ9GZN7 287 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 MS4A7Q9GZW8 240 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 OSGEPL1Q9H4B0 414 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SYNDIG1Q9H7V2 258 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 IMP3Q9NV31 184 aaKnown RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 TAS2R16Q9NYV7 291 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 OR6C2Q9NZP2 312 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 DNAJC27Q9NZQ0 273 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SLC13A4Q9UKG4 626 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SSR3Q9UNL2 185 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 OR1A2Q9Y585 309 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 COLEC10Q9Y6Z7 277 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 HEATR5BQ9P2D3 2071 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 CKAP5Q14008 2032 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 DUXAA6NLW8 204 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 PLRG1O43660 514 aaKnown RBP7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TPST2O60704 377 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 ATP6V1G1O75348 118 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 AIFM1O95831 613 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 EPPINO95925 133 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 HMGN2P05204 90 aaKnown RBP7.28□□□□□ -1.24
CXCR4-201ENST00000241393 SERPIND1P05546 499 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 HBQ1P09105 142 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 NR2F6P10588 404 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TNNI3P19429 210 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 CRYBB2P43320 205 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TNFRSF4P43489 277 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 RUNX1T1Q06455 604 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 ST3GAL3Q11203 375 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TSPAN31Q12999 210 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 LASP1Q14847 261 aaKnown RBP7.28□□□□□ -1.24
CXCR4-201ENST00000241393 RPE65Q16518 533 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 SOWAHCQ53LP3 525 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-201ENST00000241393 ATAD3BQ5T9A4 648 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TANGO2Q6ICL3 276 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 SLC27A4Q6P1M0 643 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 ZNF585AQ6P3V2 769 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 SLC36A4Q6YBV0 504 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 RASSF6Q6ZTQ3 369 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 ADGRD2Q7Z7M1 963 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 NRROSQ86YC3 692 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 PHC2Q8IXK0 858 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 CLDN22Q8N7P3 220 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 OR52I1Q8NGK6 324 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TEX47Q8TBZ9 253 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TMEM163Q8TC26 289 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 NT5CQ8TCD5 201 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TMCO6Q96DC7 493 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 ZNF681Q96N22 645 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 ZNF582Q96NG8 517 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-201ENST00000241393 SLC38A2Q96QD8 506 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 COQ7Q99807 217 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 MED18Q9BUE0 208 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TEX12Q9BXU0 123 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 POLR2J2Q9GZM3 115 aaKnown RBP7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TWSG1Q9GZX9 223 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 LMAN2LQ9H0V9 348 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 RNF167Q9H6Y7 350 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 MED17Q9NVC6 651 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 KLHL28Q9NXS3 571 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 TVP23BQ9NYZ1 205 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 NPAP1Q9NZP6 1156 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 ST6GALNAC2Q9UJ37 374 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 EXOSC1Q9Y3B2 195 aaKnown RBP7.28□□□□□ -1.24
CXCR4-201ENST00000241393 ATG4BQ9Y4P1 393 aa7.28□□□□□ -1.24
CXCR4-201ENST00000241393 MYO10Q9HD67 2058 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms