RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 OR6C2Q9NZP2 312 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 ABRACLQ9P1F3 81 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 ZNF223Q9UK11 482 aaPredicted RBP14.39□□□□□ -0.11
DDX55-201ENST00000238146 PPIEQ9UNP9 301 aaKnown RBP14.39□□□□□ -0.11
DDX55-201ENST00000238146 FLVCR2Q9UPI3 526 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 CENPVL1A0A0U1RR11 272 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 A0A1W2PRG6 482 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 ANTXRLA6NF34 631 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 PRR23D1E9PI22 279 aaPredicted RBP14.39□□□□□ -0.11
DDX55-201ENST00000238146 GSTZ1O43708 216 aaPredicted RBP14.39□□□□□ -0.11
DDX55-201ENST00000238146 PEX14O75381 377 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 HRGP04196 525 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 PRR23D2P0DMB1 279 aaPredicted RBP14.39□□□□□ -0.11
DDX55-201ENST00000238146 CLUP10909 449 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 CERS1P27544 350 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 PYCR1P32322 319 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 BLVRAP53004 296 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 ST8SIA6P61647 398 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 ZNF77Q15935 545 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 HEPHL1Q6MZM0 1159 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 THSD4Q6ZMP0 1018 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 ZNF836Q6ZNA1 936 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 KANSL1Q7Z3B3 1105 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 LRRTM4Q86VH4 590 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 OR2T4Q8NH00 348 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 PFN4Q8NHR9 129 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 WBP1Q96G27 269 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 ERMAPQ96PL5 475 aaPredicted RBP14.39□□□□□ -0.11
DDX55-201ENST00000238146 ADGRL4Q9HBW9 690 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 CMC2Q9NRP2 79 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 SCML1Q9UN30 329 aa14.39□□□□□ -0.11
DDX55-201ENST00000238146 MDC1Q14676 2089 aaKnown RBP14.39□□□□□ -0.11
DDX55-201ENST00000238146 TRAV1-2A0A0B4J238 106 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 BET1O15155 118 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 INHAP05111 366 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 CISD3P0C7P0 127 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 SAGP10523 405 aaPredicted RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 NAGAP17050 411 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 LAG3P18627 525 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 GDNFP39905 211 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 NRG3P56975 720 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 ERVK-21P61565 698 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 FOXK2Q01167 660 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 MESP2Q0VG99 397 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 NUMA1Q14980 2115 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 FCRLBQ6BAA4 426 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 SFRP4Q6FHJ7 346 aaPredicted RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 Q6ZTK2 550 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 CHMP1BQ7LBR1 199 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 KCTD20Q7Z5Y7 419 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 IZUMO1Q8IYV9 350 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 SRFBP1Q8NEF9 429 aaKnown RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 TTLQ8NG68 377 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 OR11G2Q8NGC1 345 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 SMIM4Q8WVI0 70 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 DDOQ99489 341 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 LGR4Q9BXB1 951 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 ZNF275Q9NSD4 429 aaPredicted RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 RPS6KB2Q9UBS0 482 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 KHNYNO15037 678 aaKnown RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 GMDSO60547 372 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 HOXD4P09016 255 aaPredicted RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 PRG2P13727 222 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 CTRB1P17538 263 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 VASPP50552 380 aaPredicted RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 CTRB2Q6GPI1 263 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 ERN2Q76MJ5 926 aaKnown RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 SSX6Q7RTT6 188 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 UXS1Q8NBZ7 420 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 CDS1Q92903 461 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 ZCCHC4Q9H5U6 513 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 MTHFD2LQ9H903 347 aaPredicted RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 HMX1Q9NP08 348 aaPredicted RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 MRPL15Q9P015 296 aaKnown RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 FBXL4Q9UKA2 621 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 POMT2Q9UKY4 750 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 FAM86C2PA6NEL3 165 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 ATF4P18848 351 aaPredicted RBP14.38□□□□□ -0.11
DDX55-201ENST00000238146 EPHA4P54764 986 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 TSPAN5P62079 268 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 CEBPEQ15744 281 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 FAM111BQ6SJ93 734 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 ASPGQ86U10 573 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 LHFPL5Q8TAF8 219 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 SMPDL3BQ92485 455 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 FERD3LQ96RJ6 166 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 IFT27Q9BW83 186 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 EMC3Q9P0I2 261 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 ST6GALNAC2Q9UJ37 374 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 WDR45Q9Y484 360 aa14.38□□□□□ -0.11
DDX55-201ENST00000238146 CTDSPLO15194 276 aa14.37□□□□□ -0.11
DDX55-201ENST00000238146 ACSM4P0C7M7 580 aa14.37□□□□□ -0.11
DDX55-201ENST00000238146 SLC35G4P0C7Q5 338 aa14.37□□□□□ -0.11
DDX55-201ENST00000238146 HTR2AP28223 471 aa14.37□□□□□ -0.11
DDX55-201ENST00000238146 OPCMLQ14982 345 aa14.37□□□□□ -0.11
DDX55-201ENST00000238146 TMEM255AQ5JRV8 349 aa14.37□□□□□ -0.11
DDX55-201ENST00000238146 TCTE1Q5JU00 501 aa14.37□□□□□ -0.11
DDX55-201ENST00000238146 KIAA1324Q6UXG2 1013 aaKnown RBP14.37□□□□□ -0.11
DDX55-201ENST00000238146 C12orf40Q86WS4 652 aa14.37□□□□□ -0.11
DDX55-201ENST00000238146 FAM98AQ8NCA5 519 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms