RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 SLC35A3Q9Y2D2 325 aa17.35■□□□□ 0.37
CPSF3-201ENST00000238112 TRAV27A0A087WT01 109 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 LANCL1O43813 399 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 CTSVO60911 334 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 LDB3O75112 727 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 SBK2P0C263 348 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 ZNF3P17036 446 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 E2F1Q01094 437 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 BTBD16Q32M84 506 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 ENPP7Q6UWV6 458 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 TRMT10AQ8TBZ6 339 aaKnown RBP17.34■□□□□ 0.37
CPSF3-201ENST00000238112 SLC6A17Q9H1V8 727 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 PRDM9Q9NQV7 894 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 TMEM74BQ9NUR3 256 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 ZNF624Q9P2J8 865 aaPredicted RBP17.34■□□□□ 0.37
CPSF3-201ENST00000238112 KCNE5Q9UJ90 142 aa17.34■□□□□ 0.37
CPSF3-201ENST00000238112 A0A1B0GVC2 190 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 A6NIN4 97 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 NOS3P29474 1203 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 EVI2BP34910 448 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 BTG1P62324 171 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 GPM6BQ13491 265 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 CADM2Q8N3J6 435 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 CAMKVQ8NCB2 501 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 OR51A7Q8NH64 312 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 GRHL3Q8TE85 626 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 TMEM27Q9HBJ8 222 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 C14orf105Q9NVL8 296 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 NCKAP1Q9Y2A7 1128 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 SPACA6W5XKT8 324 aa17.33■□□□□ 0.37
CPSF3-201ENST00000238112 SMLR1H3BR10 107 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 EEF1E1O43324 174 aaKnown RBP17.33■□□□□ 0.36
CPSF3-201ENST00000238112 OR2B3O76000 313 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 ACVR1BP36896 505 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 HTR2BP41595 481 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 PRRT3Q5FWE3 981 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 KRT74Q7RTS7 529 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 GPR135Q8IZ08 494 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 OR10G6Q8NH81 332 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 OR1E3Q8WZA6 343 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 SMPDL3BQ92485 455 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 STACQ99469 402 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 ADGRL4Q9HBW9 690 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 ZMIZ1Q9ULJ6 1067 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 CACNG2Q9Y698 323 aa17.33■□□□□ 0.36
CPSF3-201ENST00000238112 A0A087WV62 115 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 POM121BA6NF01 834 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 ATP1B1P05026 303 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 CLUP10909 449 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 UGT2B7P16662 529 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 ACTR1BP42025 376 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 OR12D2P58182 307 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 ACTR1AP61163 376 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 CRMP1Q14194 572 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 PLA1AQ53H76 456 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 TMEFF1Q8IYR6 380 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 SLC44A3Q8N4M1 653 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 DNAJC5GQ8N7S2 189 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 CYB561A3Q8NBI2 242 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 C17orf47Q8NEP4 570 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 NECTIN4Q96NY8 510 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 FBXL21Q9UKT6 434 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 C2orf16Q68DN1 1984 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 SLC9B1P1A6NJY1 282 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 FGF17O60258 216 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 PPP1R3DO95685 299 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 AK1P00568 194 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 TFPIP10646 304 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 HK1P19367 917 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 AHCYP23526 432 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 CAPZA2P47755 286 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 PPP2CBP62714 309 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 PPP2CAP67775 309 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 ACTC1P68032 377 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 ACTA1P68133 377 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 POU6F2P78424 691 aaPredicted RBP17.32■□□□□ 0.36
CPSF3-201ENST00000238112 PYHIN1Q6K0P9 492 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 ZNF613Q6PF04 617 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 FIGLAQ6QHK4 219 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 RPTNQ6XPR3 784 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 FLVCR1-AS1Q8TAF5 88 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 HERVK_113Q902F9 699 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 RERGQ96A58 199 aaPredicted RBP17.32■□□□□ 0.36
CPSF3-201ENST00000238112 KXD1Q9BQD3 176 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 ZNF559Q9BR84 538 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 ERVMER34-1Q9H9K5 563 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 LYRM4Q9HD34 91 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 MAT2BQ9NZL9 334 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 HSPB11Q9Y547 144 aa17.32■□□□□ 0.36
CPSF3-201ENST00000238112 FZD7O75084 574 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 DHFRP00374 187 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 IL9P15248 144 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 POLR2CP19387 275 aaPredicted RBP17.31■□□□□ 0.36
CPSF3-201ENST00000238112 GDI1P31150 447 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 PYCR1P32322 319 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 GABRA3P34903 492 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 SNRPD2P62316 118 aaKnown RBP17.31■□□□□ 0.36
CPSF3-201ENST00000238112 ZNF85Q03923 595 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 EXOSC7Q15024 291 aaKnown RBP17.31■□□□□ 0.36
CPSF3-201ENST00000238112 NTRK2Q16620 822 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms