RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 MEF2DQ14814 521 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 HFE2Q6ZVN8 426 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 PRSS45Q7RTY3 260 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 C1orf87Q8N0U7 546 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 POMGNT2Q8NAT1 580 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 OR2L8Q8NGY9 312 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 APH1BQ8WW43 257 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 SYT17Q9BSW7 474 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 V9GY05 133 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 V9GYS6 101 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 ELOA3CA0A087WX78 387 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 CASTOR2A6NHX0 329 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 UMAD1C9J7I0 102 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 SELENOPP49908 381 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 SCAPQ12770 1279 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 OR2T2Q6IF00 324 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 FCRLAQ7L513 359 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF679Q8IYX0 411 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 NPWQ8N729 165 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 LINC00116Q8NCU8 138 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 OR2AK2Q8NG84 335 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 SUV39H2Q9H5I1 410 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 SPACA1Q9HBV2 294 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 MEPEQ9NQ76 525 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 ZCCHC3Q9NUD5 404 aaKnown RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 TEX13DA0A0J9YY54 714 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF736B4DX44 427 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 RNASEK-C17orf49H0YIS7 233 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 SOD1P00441 154 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 SLURP2P0DP57 97 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 HSD3B2P26439 372 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 NRG3P56975 720 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 ZC3H14Q6PJT7 736 aaKnown RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 CLEC20AQ6ZU45 233 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 RAB8BQ92930 207 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 APIPQ96GX9 242 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 RHOVQ96L33 236 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 MIXL1Q9H2W2 232 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 PCDHGC4Q9Y5F7 938 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 H7C417 338 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 SAP18O00422 153 aaKnown RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 OR10H2O60403 315 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 CELF2O95319 508 aaKnown RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 TAS2R50P59544 299 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 GBX1Q14549 363 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 LRIF1Q5T3J3 769 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 CPOQ8IVL8 374 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 KDM8Q8N371 416 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 CELF5Q8N6W0 485 aaKnown RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 PNPLA2Q96AD5 504 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 NOL4LQ96MY1 436 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-201ENST00000236192 B3GAT2Q9NPZ5 323 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 TSPAN11A1L157 253 aa12.08□□□□□ -0.47
VAMP4-201ENST00000236192 MAFKO60675 156 aa12.08□□□□□ -0.47
VAMP4-201ENST00000236192 FGF2P09038 288 aa12.08□□□□□ -0.47
VAMP4-201ENST00000236192 TPBGQ13641 420 aa12.08□□□□□ -0.47
VAMP4-201ENST00000236192 NFATC4Q14934 902 aa12.08□□□□□ -0.47
VAMP4-201ENST00000236192 LAMTOR1Q6IAA8 161 aa12.08□□□□□ -0.47
VAMP4-201ENST00000236192 PAQR6Q6TCH4 344 aa12.08□□□□□ -0.47
VAMP4-201ENST00000236192 ABHD4Q8TB40 342 aa12.08□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF230Q9UIE0 474 aaPredicted RBP12.08□□□□□ -0.47
VAMP4-201ENST00000236192 TRBV4-1A0A0J9YWV2 114 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 CDHR4A6H8M9 788 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 GABRR3A8MPY1 467 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 DCTN6O00399 190 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 ERCC1P07992 297 aaPredicted RBP12.08□□□□□ -0.48
VAMP4-201ENST00000236192 GNSP15586 552 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 SLC6A6P31641 620 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 PBX2P40425 430 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 TLE4Q04727 773 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 MPEG1Q2M385 716 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 OR6K3Q8NGY3 331 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 HPSE2Q8WWQ2 592 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 FAM46AQ96IP4 442 aaKnown RBP12.08□□□□□ -0.48
VAMP4-201ENST00000236192 TMEM68Q96MH6 324 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 APMAPQ9HDC9 416 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 MRPS23Q9Y3D9 190 aaKnown RBP12.08□□□□□ -0.48
VAMP4-201ENST00000236192 C7orf66A4D0T2 115 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 OLFM2O95897 454 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 KLK1P06870 262 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 S100GP29377 79 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 PLA2G7Q13093 441 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 RAB11BQ15907 218 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 UNC5DQ6UXZ4 953 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 TMEM173Q86WV6 379 aaPredicted RBP12.08□□□□□ -0.48
VAMP4-201ENST00000236192 JAGN1Q8N5M9 183 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 OR2AP1Q8NGE2 309 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 OR5M8Q8NGP6 311 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 HAS2Q92819 552 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 PMM1Q92871 262 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 ALX4Q9H161 411 aaPredicted RBP12.08□□□□□ -0.48
VAMP4-201ENST00000236192 TDP1Q9NUW8 608 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 RLIMQ9NVW2 624 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 OR5H14A6NHG9 310 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 IRAK2O43187 625 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 DDTP30046 118 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 TIA1P31483 386 aaKnown RBP eCLIP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms