RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 CLDN24A6NM45 220 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 PVRP15151 417 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 ZNF91Q05481 1191 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 DEFB133Q30KQ1 61 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 UBE2NLQ5JXB2 153 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 SPRED1Q7Z699 444 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 NRARPQ7Z6K4 114 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 PGBD5Q8N414 524 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 SPTSSAQ969W0 71 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 TESQ9UGI8 421 aaKnown RBP12.54□□□□□ -0.4
NEK4-201ENST00000233027 TMPRSS11EQ9UL52 423 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 COPS3Q9UNS2 423 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 DVL2O14641 736 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 CTSAP10619 480 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 IL13RA1P78552 427 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 LTBQ06643 244 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 MLC1Q15049 377 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 TEX19Q8NA77 164 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 RHOXF1Q8NHV9 184 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 ACOT11Q8WXI4 607 aaPredicted RBP12.54□□□□□ -0.4
NEK4-201ENST00000233027 SLAMF9Q96A28 289 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 KIAA1143Q96AT1 154 aaPredicted RBP12.54□□□□□ -0.4
NEK4-201ENST00000233027 ACKR4Q9NPB9 350 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 BIN3Q9NQY0 253 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 FAM86C1Q9NVL1 165 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 A0A0J9YY10 115 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 CDC14CA4D256 554 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 SMLR1H3BR10 107 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 ITGB7P26010 798 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 GJA5P36382 358 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 DAP3P51398 398 aaKnown RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 ZNF704Q6ZNC4 412 aaPredicted RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 Q6ZSR6 202 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 OR13C2Q8NGS9 318 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 OR14K1Q8NGZ2 314 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 OR1S1Q8NH92 325 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 ASB11Q8WXH4 323 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 ZBTB8AQ96BR9 441 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 CENPOQ9BU64 300 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 SPATA6Q9NWH7 488 aaPredicted RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 BABAM2Q9NXR7 383 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 PTHP01270 115 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 HNRNPA2B1P22626 353 aaKnown RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 TACR1P25103 407 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 RBMS1P29558 406 aaKnown RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 RIPPLY1Q0D2K3 151 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 OR5M10Q6IEU7 315 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 FCRLAQ7L513 359 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 BCDIN3DQ7Z5W3 292 aaKnown RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 LRRC28Q86X40 367 aaPredicted RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 TMEFF1Q8IYR6 380 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 IL22RA1Q8N6P7 574 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 SLC2A12Q8TD20 617 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 CXCL16Q9H2A7 254 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 SCN11AQ9UI33 1791 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 IFNA17P01571 189 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 ZNF136P52737 540 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 CYCSP99999 105 aaKnown RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 TCTE1Q5JU00 501 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 ZNF322Q6U7Q0 402 aaPredicted RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 DNAJC22Q8N4W6 341 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 RADILQ96JH8 1075 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 UHRF1Q96T88 793 aaPredicted RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 ZNF436Q9C0F3 470 aaPredicted RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 DNAJC25-GNG10A0A024R161 153 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 CCDC163A0A0D9SF12 145 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 MEGF11A6BM72 1044 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 ANKRD33BA6NCL7 494 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 A8MVJ9 347 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 NFATC4Q14934 902 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 TECPR1Q7Z6L1 1165 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 OR8J2Q8NGG1 315 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 TANKQ92844 425 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 GALNT9Q9HCQ5 603 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 CACNG3O60359 315 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 DOK2O60496 412 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 CD79AP11912 226 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 SNRPBP14678 240 aaKnown RBP12.53□□□□□ -0.4
NEK4-201ENST00000233027 TAS2R31P59538 309 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 SORDQ00796 357 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 GLO1Q04760 184 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 BATFQ16520 125 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 CELF2-AS1Q8N7Q2 184 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 POLHQ9Y253 713 aa12.53□□□□□ -0.4
NEK4-201ENST00000233027 SLC16A7O60669 478 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 FZD7O75084 574 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 SLC10A3P09131 477 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.4
NEK4-201ENST00000233027 SERPINA2P20848 420 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 CLDN12P56749 244 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 MORN1Q5T089 497 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 VASNQ6EMK4 673 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 DOT1LQ8TEK3 1739 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 NKX2-4Q9H2Z4 354 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 HRH4Q9H3N8 390 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms