RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 MAOBP27338 520 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 PBLDP30039 288 aaPredicted RBP16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 SEC61A1P61619 476 aaKnown RBP16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 LMAN2Q12907 356 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 OR6V1Q8N148 313 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 RASGEF1AQ8N9B8 481 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 C17orf47Q8NEP4 570 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 KAT2AQ92830 837 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 OR2A7Q96R45 310 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 ZDHHC6Q9H6R6 413 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 EVA1AQ9H8M9 152 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 HCFC1R1Q9NWW0 138 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 NTMQ9P121 344 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 FRS3O43559 492 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 ADRB1P08588 477 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 ALPPL2P10696 532 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 TYRP14679 529 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 EPCAMP16422 314 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 AHRP35869 848 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 CTSOP43234 321 aaPredicted RBP16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 GK2Q14410 553 aaPredicted RBP16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 SHHQ15465 462 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 PLBD1Q6P4A8 553 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 ZNF620Q6ZNG0 422 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 HSD11B1LQ7Z5J1 315 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 DIO2Q92813 273 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 KLK6Q92876 244 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 CAMK1GQ96NX5 476 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 BCL2L10Q9HD36 194 aa16.43■□□□□ 0.22
CDKN1B-201ENST00000228872 CHURC1-FNTBB4DL54 471 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 CD70P32970 193 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 FUT5Q11128 374 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ACSM3Q53FZ2 586 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ELFN2Q5R3F8 820 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 NIPAL3Q6P499 406 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 GID4Q8IVV7 300 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 MEIOBQ8N635 442 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 OR5T2Q8NGG2 359 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ELP4Q96EB1 424 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 PINK1Q9BXM7 581 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 QRSL1Q9H0R6 528 aaKnown RBP16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 MED20Q9H944 212 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 DPP7Q9UHL4 492 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 MPTX1A8MV57 137 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 SIGLEC5O15389 551 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ARPC5O15511 151 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 SDC3O75056 442 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 MOSPD3O75425 235 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ITGA10O75578 1167 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 KDM4BO94953 1096 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 MT-ND5P03915 603 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 HIST1H2ABP04908 130 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 HMGN1P05114 100 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 SIGLEC14Q08ET2 396 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 GPM6BQ13491 265 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 MAPK14Q16539 360 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 NHLRC1Q6VVB1 395 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 Q6ZVL8 140 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 HIST3H2AQ7L7L0 130 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 SYT9Q86SS6 491 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 MCATQ8IVS2 390 aaKnown RBP16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 OR2T33Q8NG76 320 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 OR10H4Q8NGA5 316 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 OR13C5Q8NGS8 318 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ZDHHC1Q8WTX9 485 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 HIST1H2ACQ93077 130 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 SMAD5Q99717 465 aaKnown RBP16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ANKRD19PQ9H560 264 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 EXOSC3Q9NQT5 275 aaKnown RBP16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 AHSPQ9NZD4 102 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 PRRC2BQ5JSZ5 2229 aaKnown RBP16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 LEFTY2O00292 366 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 EPXP11678 715 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ACVR1BP36896 505 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 RPL35P42766 123 aaKnown RBP16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 HOXA1P49639 335 aaPredicted RBP16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 STXBP1P61764 594 aaKnown RBP16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 PABPC1L2AQ5JQF8 200 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 MPP7Q5T2T1 576 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 PAQR7Q86WK9 346 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 NKAIN4Q8IVV8 208 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 SLC44A3Q8N4M1 653 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 SUN3Q8TAQ9 357 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 GIMAP5Q96F15 307 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 PGLYRP3Q96LB9 341 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 NDC1Q9BTX1 674 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ARL6Q9H0F7 186 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 PLEKHA1Q9HB21 404 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 ZMIZ1Q9ULJ6 1067 aa16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 GPR55Q9Y2T6 319 aaPredicted RBP16.42■□□□□ 0.22
CDKN1B-201ENST00000228872 PLXND1Q9Y4D7 1925 aa16.41■□□□□ 0.22
CDKN1B-201ENST00000228872 KLF4O43474 513 aa16.41■□□□□ 0.22
CDKN1B-201ENST00000228872 TBX6O95947 436 aaPredicted RBP16.41■□□□□ 0.22
CDKN1B-201ENST00000228872 RHOP08100 348 aa16.41■□□□□ 0.22
CDKN1B-201ENST00000228872 ST3GAL3Q11203 375 aa16.41■□□□□ 0.22
CDKN1B-201ENST00000228872 ZNF697Q5TEC3 545 aa16.41■□□□□ 0.22
CDKN1B-201ENST00000228872 MEPCEQ7L2J0 689 aaKnown RBP16.41■□□□□ 0.22
CDKN1B-201ENST00000228872 LINGO2Q7L985 606 aa16.41■□□□□ 0.22
CDKN1B-201ENST00000228872 METTL3Q86U44 580 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms