RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 OSBPL11Q9BXB4 747 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 MS4A7Q9GZW8 240 aaPredicted RBP5.19□□□□□ -1.58
AFP-201ENST00000226359 C11orf54Q9H0W9 315 aaPredicted RBP5.19□□□□□ -1.58
AFP-201ENST00000226359 DEFB127Q9H1M4 99 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 MYNNQ9NPC7 610 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 SLC35C2Q9NQQ7 365 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 DDX18Q9NVP1 670 aaKnown RBP5.19□□□□□ -1.58
AFP-201ENST00000226359 C1orf109Q9NX04 203 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 NDE1Q9NXR1 346 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 ETAA1Q9NY74 926 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 TAS2R9Q9NYW1 312 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 TINAGQ9UJW2 476 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 ACAD8Q9UKU7 415 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 ZDHHC8Q9ULC8 765 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 C15orf41Q9Y2V0 281 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 MEMO1Q9Y316 297 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 TIMM22Q9Y584 194 aa5.19□□□□□ -1.58
AFP-201ENST00000226359 RP1L1Q8IWN7 2480 aaPredicted RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 NBASA2RRP1 2371 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 TRGV5A0A0B4J1U4 118 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 A0A1B0GTH9 108 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 FRG2CA6NGY1 282 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 AIM2O14862 343 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 WDR1O75083 606 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 TRAPPC6AO75865 159 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 CLDN14O95500 239 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 GRPP07492 148 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 CCL3P10147 92 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 GABRA1P14867 456 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 LBPP18428 481 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 ELAVL4P26378 380 aaKnown RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 PTGER4P35408 488 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 DNASE1L1P49184 302 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 ATP4BP51164 291 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 SRSF1Q07955 248 aaKnown RBP eCLIP5.18□□□□□ -1.58
AFP-201ENST00000226359 STX5Q13190 355 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 MAD2L1Q13257 205 aaPredicted RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 ZNF791Q3KP31 576 aaPredicted RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 MMEL1Q495T6 779 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 VPS26BQ4G0F5 336 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 AGKQ53H12 422 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 CMPK2Q5EBM0 449 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 CD300LDQ6UXZ3 194 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 NUP54Q7Z3B4 507 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 SZRD1Q7Z422 152 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 NET1Q7Z628 596 aaPredicted RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 ATG4DQ86TL0 474 aaPredicted RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 PM20D2Q8IYS1 436 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 OR10G3Q8NGC4 313 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 OR52R1Q8NGF1 315 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 SPPL2AQ8TCT8 520 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 DOK4Q8TEW6 326 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 CA5BP1Q8WTZ4 195 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 TUBGCP3Q96CW5 907 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 OMA1Q96E52 524 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 RNF125Q96EQ8 232 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 ZBED6CLQ96FA7 236 aaPredicted RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 KCNA7Q96RP8 456 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 PRDM13Q9H4Q3 707 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 EFCAB1Q9HAE3 211 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 SIRT5Q9NXA8 310 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 TUBA8Q9NY65 449 aaPredicted RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 MAT2BQ9NZL9 334 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 ZNF835Q9Y2P0 537 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 POLR3HQ9Y535 204 aaPredicted RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 FLNBO75369 2602 aaKnown RBP5.18□□□□□ -1.58
AFP-201ENST00000226359 SCN3AQ9NY46 2000 aa5.18□□□□□ -1.58
AFP-201ENST00000226359 C15orf38-AP3S2A0A0A6YYH1 394 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 WIPF3A6NGB9 483 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 TMEM200CA6NKL6 621 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 NPIPA2E9PIF3 369 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 NPIPA3F8WFD2 350 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 HRKO00198 91 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 PPP6CO00743 305 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 CFLARO15519 480 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 ERN1O75460 977 aaKnown RBP5.17□□□□□ -1.58
AFP-201ENST00000226359 REM1O75628 298 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 PDE9AO76083 593 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 NADKO95544 446 aaPredicted RBP5.17□□□□□ -1.58
AFP-201ENST00000226359 ANP32DO95626 131 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 LINC00032P0C843 101 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 GPX3P22352 226 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 ACVR2AP27037 513 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 HTR1EP28566 365 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 CHRNB4P30926 498 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 PIGAP37287 484 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 MAGEA5P43359 124 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 PPICP45877 212 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 NUDT2P50583 147 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 ERVFRD-1P60508 538 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 RPL38P63173 70 aaKnown RBP5.17□□□□□ -1.58
AFP-201ENST00000226359 HSF1Q00613 529 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 SNTA1Q13424 505 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 EXOSC7Q15024 291 aaKnown RBP5.17□□□□□ -1.58
AFP-201ENST00000226359 NNATQ16517 81 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 DECR1Q16698 335 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 TRMT5Q32P41 509 aaKnown RBP5.17□□□□□ -1.58
AFP-201ENST00000226359 UGT3A2Q3SY77 523 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 ATP6AP1LQ52LC2 224 aa5.17□□□□□ -1.58
AFP-201ENST00000226359 C1orf146Q5VVC0 180 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms