RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 C3P1Q6ZMU1 363 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.35□□□□□ -0.114e-8■■□□□ 12
VTN-201ENST00000226218 FRRS1Q6ZNA5 592 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 NUP43Q8NFH3 380 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 OR6M1Q8NGM8 313 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 OR5J2Q8NH18 312 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 FANK1Q8TC84 345 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 DACT3Q96B18 629 aaPredicted RBP14.35□□□□□ -0.11
VTN-201ENST00000226218 CMTM3Q96MX0 182 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 TEAD3Q99594 435 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 TMPRSS13Q9BYE2 586 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 WDR26Q9H7D7 661 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 HRASLSQ9HDD0 168 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 CMC2Q9NRP2 79 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 ZNF443Q9Y2A4 671 aaPredicted RBP14.35□□□□□ -0.11
VTN-201ENST00000226218 MRPS7Q9Y2R9 242 aaKnown RBP14.35□□□□□ -0.11
VTN-201ENST00000226218 RWDD3Q9Y3V2 267 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 ATG4BQ9Y4P1 393 aa14.35□□□□□ -0.11
VTN-201ENST00000226218 OR2M5A3KFT3 312 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 ANTXRLA6NF34 631 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 NMBP08949 121 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 FUT1P19526 365 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 MAKP20794 623 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 NT5EP21589 574 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 HSD17B2P37059 387 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 PRR5P85299 388 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 DPTQ07507 201 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 ZNF273Q14593 569 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 AGERQ15109 404 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 METTL11BQ5VVY1 283 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 MTFR2Q6P444 385 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 SYT9Q86SS6 491 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 DPH1Q9BZG8 443 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 PRKAB1Q9Y478 270 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 DENND4AQ7Z401 1863 aa14.34□□□□□ -0.11
VTN-201ENST00000226218 A8MXK9 166 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 VEGFDO43915 354 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 LYPD3O95274 346 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 AIFM1O95831 613 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 ALDOBP05062 364 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 ADRB1P08588 477 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 CPN1P15169 458 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 PSMB1P20618 241 aaKnown RBP14.33□□□□□ -0.11
VTN-201ENST00000226218 PTNP21246 168 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 MC3RP41968 323 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 CAPZA2P47755 286 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 VEGFCP49767 419 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.11
VTN-201ENST00000226218 SIM1P81133 766 aaPredicted RBP14.33□□□□□ -0.11
VTN-201ENST00000226218 BTN1A1Q13410 526 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 COL9A2Q14055 689 aaPredicted RBP14.33□□□□□ -0.11
VTN-201ENST00000226218 SLC9A5Q14940 896 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 ZSWIM7Q19AV6 140 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 WDR88Q6ZMY6 472 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 LINC01555Q8NAE3 123 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 GHSRQ92847 366 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 ELP4Q96EB1 424 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 CXorf58Q96LI9 332 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 PRDM7Q9NQW5 492 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 SPHK2Q9NRA0 654 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 SIDT1Q9NXL6 827 aaKnown RBP14.33□□□□□ -0.11
VTN-201ENST00000226218 RABL2AQ9UBK7 228 aaPredicted RBP14.33□□□□□ -0.11
VTN-201ENST00000226218 SLC23A2Q9UGH3 650 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 FBXL3Q9UKT7 428 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 RABL2BQ9UNT1 228 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 CA5BQ9Y2D0 317 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 IRAK3Q9Y616 596 aa14.33□□□□□ -0.11
VTN-201ENST00000226218 J3QLW9 94 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 OGG1O15527 345 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 GALR3O60755 368 aaPredicted RBP14.33□□□□□ -0.12
VTN-201ENST00000226218 ITGA10O75578 1167 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 B3GALNT1O75752 331 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 SERPINI2O75830 405 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 TFP02787 698 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 MRPL3P09001 348 aaKnown RBP14.33□□□□□ -0.12
VTN-201ENST00000226218 GIPP09681 153 aaPredicted RBP14.33□□□□□ -0.12
VTN-201ENST00000226218 C8orf89P0DMQ9 161 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 C6P13671 934 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 F3P13726 295 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 ZNF19P17023 458 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 C4BPBP20851 252 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 TEAD1P28347 426 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 CALCRP30988 508 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 NUP62P37198 522 aaPredicted RBP14.33□□□□□ -0.12
VTN-201ENST00000226218 CCR2P41597 374 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 TMEM35AQ53FP2 167 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 UBE2NLQ5JXB2 153 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 SFRP4Q6FHJ7 346 aaPredicted RBP14.33□□□□□ -0.12
VTN-201ENST00000226218 SLC48A1Q6P1K1 146 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 FAM198BQ6UWH4 519 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 GLDNQ6ZMI3 551 aaPredicted RBP14.33□□□□□ -0.12
VTN-201ENST00000226218 THSD4Q6ZMP0 1018 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 ZNF836Q6ZNA1 936 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 SSX6Q7RTT6 188 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 SP7Q8TDD2 431 aaPredicted RBP14.33□□□□□ -0.12
VTN-201ENST00000226218 RIT1Q92963 219 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 SLC35A4Q96G79 324 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 HS6ST2Q96MM7 605 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 ZNF681Q96N22 645 aa14.33□□□□□ -0.12
VTN-201ENST00000226218 UTP23Q9BRU9 249 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms