RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 OR2T1O43869 369 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 SUSD5O60279 629 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 KCNK5O95279 499 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 PTAFRP25105 342 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 HOXA1P49639 335 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 GTDC1Q4AE62 458 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 ANKLE1Q8NAG6 615 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 DMBX1Q8NFW5 382 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 PSMF1Q92530 271 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 ARNT2Q9HBZ2 717 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 COL2A1P02458 1487 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 F5H5P2 479 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 SLC16A7O60669 478 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 C1orf105O95561 183 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 PTGER4P35408 488 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 ATP1B3P54709 279 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 FAM78AQ5JUQ0 283 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 SLC16A14Q7RTX9 510 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 BBS1Q8NFJ9 593 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 CTRCQ99895 268 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 LMF2Q9BU23 707 aaKnown RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 ZFP57Q9NU63 452 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 DENRO43583 198 aaKnown RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 SSX4O60224 188 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 RAB3DO95716 219 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 GYPBP06028 91 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 IL2RGP31785 369 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 CSNK1EP49674 416 aaKnown RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 TMEM31Q5JXX7 168 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 ENTPD8Q5MY95 495 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 METTL25Q8N6Q8 603 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 SAT2Q96F10 170 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-201ENST00000225964 BORCS6Q96GS4 357 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 GNB4Q9HAV0 340 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 BTNL2Q9UIR0 455 aa12.42□□□□□ -0.42
COL1A1-201ENST00000225964 UBFD1O14562 309 aaKnown RBP12.41□□□□□ -0.42
COL1A1-201ENST00000225964 TUSC2O75896 110 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 MTHFD2P13995 350 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 TCN2P20062 427 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 PROZP22891 400 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 TAS2R31P59538 309 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 SCD5Q86SK9 330 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 RELL1Q8IUW5 271 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 SERPINA12Q8IW75 414 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 GTPBP8Q8N3Z3 284 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-201ENST00000225964 C19orf47Q8N9M1 422 aaKnown RBP12.41□□□□□ -0.42
COL1A1-201ENST00000225964 AGBL5Q8NDL9 886 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 OR4N2Q8NGD1 307 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 LMO3Q8TAP4 145 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 C7orf50Q9BRJ6 194 aaKnown RBP12.41□□□□□ -0.42
COL1A1-201ENST00000225964 VN1R3Q9BXE9 311 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 PPIL3Q9H2H8 161 aaKnown RBP12.41□□□□□ -0.42
COL1A1-201ENST00000225964 SETD1AO15047 1707 aaKnown RBP12.41□□□□□ -0.42
COL1A1-201ENST00000225964 ANTXRLA6NF34 631 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 MROH6A6NGR9 719 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 CLN5O75503 358 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 PPP5CP53041 499 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 SNAPC3Q92966 411 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 ISG20Q96AZ6 181 aaKnown RBP12.41□□□□□ -0.42
COL1A1-201ENST00000225964 GMLQ99445 158 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 AKAIN1P0CW23 69 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 SLC22A10Q63ZE4 541 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 DPY19L2P1Q6NXN4 242 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF417Q8TAU3 575 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 C4orf36Q96KX1 117 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 LIPCP11150 499 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 POU3F1Q03052 451 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-201ENST00000225964 SSX2Q16385 188 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF674Q2M3X9 581 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 PAN3Q58A45 887 aaKnown RBP12.41□□□□□ -0.42
COL1A1-201ENST00000225964 PM20D1Q6GTS8 502 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 KNDC1Q76NI1 1749 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 CPXM2Q8N436 756 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 HSD17B8Q92506 261 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 EDARQ9UNE0 448 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 HSPE1-MOB4S4R3N1 261 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 CHD4Q14839 1912 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 G3V3Y1 287 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 SC5DO75845 299 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 SLC34A2O95436 690 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 PTPN6P29350 595 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 DYRK1AQ13627 763 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 OR1Q1Q15612 314 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 TMEM71Q6P5X7 295 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 FER1L6-AS2Q96M78 137 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 CACNG6Q9BXT2 260 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 GAREM1Q9H706 876 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 OLAHQ9NV23 265 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 GNG13Q9P2W3 67 aa12.41□□□□□ -0.42
COL1A1-201ENST00000225964 MAOAP21397 527 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 S100A7P31151 101 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 CXCR4P61073 352 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 DCDP81605 110 aaKnown RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 ZC3H3Q8IXZ2 948 aaKnown RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 MYLIPQ8WY64 445 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 CNOT9Q92600 299 aaKnown RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 BPIFA2Q96DR5 249 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 DAZAP1Q96EP5 407 aaKnown RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 TIMM29Q9BSF4 260 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms