RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 C11orf65Q8NCR3 313 aa13□□□□□ -0.33
SUPT4H1-201ENST00000225504 CCDC197Q8NCU1 140 aa13□□□□□ -0.33
SUPT4H1-201ENST00000225504 TOR1AIP2Q8NFQ8 470 aa13□□□□□ -0.33
SUPT4H1-201ENST00000225504 CCDC120Q96HB5 630 aa13□□□□□ -0.33
SUPT4H1-201ENST00000225504 SH3GL1Q99961 368 aa13□□□□□ -0.33
SUPT4H1-201ENST00000225504 ECSITQ9BQ95 431 aa13□□□□□ -0.33
SUPT4H1-201ENST00000225504 PIGQQ9BRB3 760 aa13□□□□□ -0.33
SUPT4H1-201ENST00000225504 TP63Q9H3D4 680 aaPredicted RBP13□□□□□ -0.33
SUPT4H1-201ENST00000225504 HHATLQ9HCP6 504 aa13□□□□□ -0.33
SUPT4H1-201ENST00000225504 ZNF232Q9UNY5 417 aa13□□□□□ -0.33
SUPT4H1-201ENST00000225504 GPC6Q9Y625 555 aaPredicted RBP13□□□□□ -0.33
SUPT4H1-201ENST00000225504 E9PLN8 166 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 NTN1O95631 604 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 EPPINO95925 133 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 ETS2P15036 469 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 ZNF708P17019 499 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 SHC1P29353 583 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 PCBP3P57721 371 aaKnown RBP12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 SESN3P58005 492 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 DMTNQ08495 405 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 PMPCAQ10713 525 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 ART3Q13508 389 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 CBFBQ13951 182 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 VMACQ2NL98 169 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 ENPP6Q6UWR7 440 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 RPTNQ6XPR3 784 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 SEM1Q6ZVN7 128 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 CMIPQ8IY22 773 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 HIPK4Q8NE63 616 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 BCAS4Q8TDM0 211 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 SMPDL3BQ92485 455 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 ZBTB8AQ96BR9 441 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 DTNBP1Q96EV8 351 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 VKORC1Q9BQB6 163 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 TUBA1CQ9BQE3 449 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 WFDC6Q9BQY6 131 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 SPATA9Q9BWV2 254 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 PCNX1Q96RV3 2341 aa12.99□□□□□ -0.33
SUPT4H1-201ENST00000225504 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 C7orf72A4D263 438 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 AHRRA9YTQ3 701 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 M0QX08 132 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 NME4O00746 187 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 FRS3O43559 492 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 WDR1O75083 606 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 MFN2O95140 757 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 THBS1P07996 1170 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 GLI4P10075 376 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 PEPDP12955 493 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 POU3F2P20265 443 aaPredicted RBP12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 GCKP35557 465 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 ACAA2P42765 397 aaKnown RBP12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 IDH2P48735 452 aaKnown RBP12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 CRYBA2P53672 197 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 NUP107P57740 925 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 HOXC5Q00444 222 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 RBBP4Q09028 425 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 LARS2Q15031 903 aaKnown RBP12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 CDSNQ15517 529 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 BCL2A1Q16548 175 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 LIN52Q52LA3 116 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 C1orf185Q5T7R7 199 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 FAM91A1Q658Y4 838 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 HACD2Q6Y1H2 254 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 HOPXQ9BPY8 73 aaPredicted RBP12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 TTYH2Q9BSA4 534 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 PRR14Q9BWN1 585 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 TMEM185BQ9H7F4 350 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 EXOSC3Q9NQT5 275 aaKnown RBP12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 ACER3Q9NUN7 267 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 TAGLN3Q9UI15 199 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 IFT52Q9Y366 437 aa12.98□□□□□ -0.33
SUPT4H1-201ENST00000225504 FIGNL2A6NMB9 653 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 FAM47E-STBD1D6RA91 191 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 H0Y3Z8 333 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 ETV2O00321 342 aaPredicted RBP12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 NDUFAB1O14561 156 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 SEC14L5O43304 696 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 TOXO94900 526 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 OPN1SWP03999 348 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 PGCP20142 388 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 PCGF2P35227 344 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 SLC7A2P52569 658 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 PSME3P61289 254 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 EPS8Q12929 822 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 ACSF3Q4G176 576 aaPredicted RBP12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 SLC25A53Q5H9E4 307 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 RNF220Q5VTB9 566 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 POMZP3Q6PJE2 187 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 GGNQ86UU5 652 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 KRT73Q86Y46 540 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 GRAMD2AQ8IUY3 354 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 PM20D2Q8IYS1 436 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 LILRA2Q8N149 483 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 SMYD1Q8NB12 490 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 ATP6V1C2Q8NEY4 427 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 ZPLD1Q8TCW7 415 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 SSC4DQ8WTU2 575 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 TRIB1Q96RU8 372 aa12.97□□□□□ -0.33
SUPT4H1-201ENST00000225504 ANGPT4Q9Y264 503 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms