RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 XKR7Q5GH72 579 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 PDSS1Q5T2R2 415 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 FAM91A1Q658Y4 838 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 CDC73Q6P1J9 531 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 LILRA2Q8N149 483 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 ZNF781Q8N8C0 355 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 PHOSPHO1Q8TCT1 267 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 ROBO4Q8WZ75 1007 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 OSTF1Q92882 214 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 PERPQ96FX8 193 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 C3orf30Q96M34 536 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 KLHL15Q96M94 604 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 Q96MF0 132 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 STACQ99469 402 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 MYLK2Q9H1R3 596 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 C12orf49Q9H741 205 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 CXorf36Q9H7Y0 433 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 DUSP22Q9NRW4 184 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 MARCOQ9UEW3 520 aaPredicted RBP13.4□□□□□ -0.26
UPK3A-201ENST00000216211 KCNE3Q9Y6H6 103 aa13.4□□□□□ -0.26
UPK3A-201ENST00000216211 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.39□□□□□ -0.27
UPK3A-201ENST00000216211 KLF4O43474 513 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 EFNA2O43921 213 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 SKAP2O75563 359 aaPredicted RBP13.39□□□□□ -0.27
UPK3A-201ENST00000216211 ATP5HO75947 161 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 NUDT14O95848 222 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 C6orf47O95873 294 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 ATP6V1C1P21283 382 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 AGTR1P30556 359 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 RPL3P39023 403 aaKnown RBP13.39□□□□□ -0.27
UPK3A-201ENST00000216211 CCT3P49368 545 aaKnown RBP13.39□□□□□ -0.27
UPK3A-201ENST00000216211 CARD18P57730 90 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 ATP6AP1LQ52LC2 224 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 BEX5Q5H9J7 111 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 DCST2Q5T1A1 773 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 CBLN3Q6UW01 205 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 EPGNQ6UW88 154 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 C20orf204Q6ZNR8 217 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 BEND4Q6ZU67 534 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 MTDHQ86UE4 582 aaKnown RBP13.39□□□□□ -0.27
UPK3A-201ENST00000216211 HOMEZQ8IX15 550 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 KIRREL3Q8IZU9 778 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 CIARTQ8N365 385 aaPredicted RBP13.39□□□□□ -0.27
UPK3A-201ENST00000216211 FBXO27Q8NI29 283 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 ADAMTS15Q8TE58 950 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 OR5P2Q8WZ92 322 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 ACTRT3Q9BYD9 372 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 SRXN1Q9BYN0 137 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 SAR1AQ9NR31 198 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 GLRX2Q9NS18 164 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 ZDHHC2Q9UIJ5 367 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 CARD8Q9Y2G2 431 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 ROS1P08922 2347 aa13.39□□□□□ -0.27
UPK3A-201ENST00000216211 H7C1Q1 480 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 CCDC22O60826 627 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 PLAUP00749 431 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 PPP3CBP16298 524 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 EIF1P41567 113 aaKnown RBP13.38□□□□□ -0.27
UPK3A-201ENST00000216211 IDH3AP50213 366 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 P2RX1P51575 399 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 ZNF239Q16600 458 aaKnown RBP13.38□□□□□ -0.27
UPK3A-201ENST00000216211 NDUFAF6Q330K2 333 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 SPDYE7PQ495Y7 208 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 KLHL26Q53HC5 615 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 C6orf136Q5SQH8 315 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.38□□□□□ -0.27
UPK3A-201ENST00000216211 IL23RQ5VWK5 629 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 MAVSQ7Z434 540 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 WFDC8Q8IUA0 241 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 KRTCAP2Q8N6L1 136 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 FNDC5Q8NAU1 212 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 ZNF527Q8NB42 609 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 OR56A1Q8NGH5 318 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 OR5AK3PQ8NH89 298 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 ACTR6Q9GZN1 396 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 ATAD3AQ9NVI7 634 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 GPATCH2Q9NW75 528 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 ICAM5Q9UMF0 924 aa13.38□□□□□ -0.27
UPK3A-201ENST00000216211 FAF1Q9UNN5 650 aaPredicted RBP13.38□□□□□ -0.27
UPK3A-201ENST00000216211 SMAD7O15105 426 aaKnown RBP13.37□□□□□ -0.27
UPK3A-201ENST00000216211 HDAC3O15379 428 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 DNAJC8O75937 253 aaPredicted RBP13.37□□□□□ -0.27
UPK3A-201ENST00000216211 NTN1O95631 604 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 LY6G6DO95868 133 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 HEXAP06865 529 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 NID1P14543 1247 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 ELK4P28324 431 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 KRT72Q14CN4 511 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 TOMM34Q15785 309 aaPredicted RBP13.37□□□□□ -0.27
UPK3A-201ENST00000216211 LSM12Q3MHD2 195 aaKnown RBP13.37□□□□□ -0.27
UPK3A-201ENST00000216211 GTF2IRD2BQ6EKJ0 949 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 PRSS57Q6UWY2 283 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 ZNF704Q6ZNC4 412 aaPredicted RBP13.37□□□□□ -0.27
UPK3A-201ENST00000216211 PLEKHM3Q6ZWE6 761 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 GTF2IRD2Q86UP8 949 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 STK32CQ86UX6 486 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 TUSC5Q8IXB3 177 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 ZNF614Q8N883 585 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 ATP6V1C2Q8NEY4 427 aa13.37□□□□□ -0.27
UPK3A-201ENST00000216211 PSMA8Q8TAA3 256 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms