RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Pea15Q62048 130 aa13.99□□□□□ -0.17
Nup54-201ENSMUST00000038514 Ccdc85bQ6PDY0 202 aa13.99□□□□□ -0.17
Nup54-201ENSMUST00000038514 Klhl31Q8BWA5 634 aa13.99□□□□□ -0.17
Nup54-201ENSMUST00000038514 Zfp119bQ8K0G9 543 aa13.99□□□□□ -0.17
Nup54-201ENSMUST00000038514 NifkQ91VE6 317 aaKnown RBP13.99□□□□□ -0.17
Nup54-201ENSMUST00000038514 Tmem35aQ9D328 167 aa13.99□□□□□ -0.17
Nup54-201ENSMUST00000038514 Tas2r103Q9JKA3 312 aa13.99□□□□□ -0.17
Nup54-201ENSMUST00000038514 Dnaja4Q9JMC3 397 aa13.99□□□□□ -0.17
Nup54-201ENSMUST00000038514 Snrnp200Q6P4T2 2136 aaKnown RBP13.99□□□□□ -0.17
Nup54-201ENSMUST00000038514 TmppeD3Z286 447 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Adap1E9PY16 374 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Gm3327F7C9A1 213 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Zfp619G3X9T2 1161 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Vmn1r14H3BJ46 303 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 ArafP04627 604 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Apoa2P09813 102 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Nckap1P28660 1128 aaKnown RBP13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Hnrnpa1P49312 320 aaKnown RBP13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Lhx1P63006 406 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Dhrs11Q3U0B3 260 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Spire1Q52KF3 598 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Ffar4Q7TMA4 361 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Pum2Q80U58 1066 aaKnown RBP13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Fjx1Q8BQB4 450 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Gm9938Q8C3P5 112 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Eri3Q8C460 337 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Mchr1Q8JZL2 353 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Slc1a7Q8JZR4 559 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Tmem17Q8K0U3 198 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Tctn3Q8R2Q6 595 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Olfr952Q8VFD7 314 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Olfr99Q8VFE4 305 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 CrebzfQ91ZR3 358 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Pcyt2Q922E4 404 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Ndufa5Q9CPP6 116 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Lamtor1Q9CQ22 161 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Cmtm8Q9CZR4 173 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Olfr955Q9EQ97 314 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Olfr1025-ps1A0A140T8K3 312 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Zfp978A2A7I1 335 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Zfp937A2ANU7 503 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 9630041A04RikD3Z3U4 205 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 H2-ObO35424 271 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Ccrl2O35457 360 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 BckdkO55028 412 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Rfx3P48381 749 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Atp5a1Q03265 553 aaKnown RBP13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Apcdd1Q3U128 514 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 B3gnt6Q3USF0 391 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Rnf223Q3UV31 285 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 UnklQ5FWH2 727 aaKnown RBP13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Slc25a32Q8BMG8 316 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Spon2Q8BMS2 330 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 4931417E11RikQ9CR05 305 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 MmabQ9D273 237 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Pebp4Q9D9G2 242 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Slc7a5Q9Z127 512 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 Deaf1Q9Z1T5 566 aa13.98□□□□□ -0.17
Nup54-201ENSMUST00000038514 I0C0044D17RikA6PWL3 169 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 SvaE9PX96 165 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Gm20715E9Q3L7 95 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Ms4a7E9Q9V5 267 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Stxbp1O08599 594 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Csnk2a2O54833 350 aaKnown RBP13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Lgals7O54974 136 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Cacng2O88602 323 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 PlauP06869 433 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Gna13P27601 377 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Thbs1P35441 1170 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Tbx5P70326 518 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Fgf11P70378 225 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Csf2raQ00941 388 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 EndouQ3V188 412 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Crhr2Q60748 411 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Prg2Q61878 223 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Gpbp1l1Q6NZP2 473 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Dcaf12l2Q8BGW4 469 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 H2afy2Q8CCK0 372 aaKnown RBP13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Noxa1Q8CJ00 444 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Dusp15Q8R4V2 235 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Hint3Q9CPS6 165 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Mrm2Q9CPY0 246 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 2410137M14RikQ9CWF0 162 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Mfsd2aQ9DA75 534 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Clec1bQ9JL99 229 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Dnajb8Q9QYI7 227 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Decr2Q9WV68 292 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Rasal1Q9Z268 799 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 H2afb1S4R1E0 115 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Vmn1r169L7N275 304 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Vmn2r52L7N2B2 852 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Prdx6O08709 224 aaKnown RBP13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Nthl1O35980 300 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Yme1l1O88967 715 aaKnown RBP13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Vwa5b2Q3UR50 1248 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 ToxQ66JW3 526 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Lrrc75bQ7TPD7 306 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Trmt12Q8BG71 446 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Hat1Q8BY71 416 aa13.97□□□□□ -0.17
Nup54-201ENSMUST00000038514 Slc5a8Q8BYF6 611 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms