RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PSMD4P55036 377 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 CDC42P60953 191 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 SNRPGP62308 76 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 EEF1A1P68104 462 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 INSM1Q01101 510 aaPredicted RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 ALDH6A1Q02252 535 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 ILKQ13418 452 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 TMED1Q13445 227 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 TRAM2Q15035 370 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 TIMM50Q3ZCQ8 353 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 ENTPD8Q5MY95 495 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 MEDAGQ5VYS4 303 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF385CQ66K41 422 aaPredicted RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF770Q6IQ21 691 aaPredicted RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 PODNL1Q6PEZ8 512 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 C16orf87Q6PH81 154 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 RAB11FIP2Q7L804 512 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 RRM2BQ7LG56 351 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 PRR22Q8IZ63 422 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 SLC15A4Q8N697 577 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 AQP11Q8NBQ7 271 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 PRSS33Q8NF86 280 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 KBTBD8Q8NFY9 601 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 OR6Q1Q8NGQ2 317 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 OR1N1Q8NGS0 311 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 PMM1Q92871 262 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 HSPBAP1Q96EW2 488 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 COPS4Q9BT78 406 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 NRSN2Q9GZP1 204 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 CCDC90BQ9GZT6 254 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 NXF2Q9GZY0 626 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 NXF5Q9H1B4 397 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 MMP27Q9H306 513 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 C19orf25Q9UFG5 118 aaPredicted RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 OSGIN1Q9UJX0 560 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 MGAT4BQ9UQ53 548 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 PTRH2Q9Y3E5 179 aaKnown RBP8.17□□□□□ -1.1
PHGDH-219ENST00000641513 CPAMD8Q8IZJ3 1885 aa8.17□□□□□ -1.1
PHGDH-219ENST00000641513 WDFY4Q6ZS81 3184 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 VPS13AQ96RL7 3174 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 CDC14CA4D256 554 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 PCNX2A6NKB5 2137 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 VSTM2BA6NLU5 285 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 OR6C76A6NM76 312 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 CNOT3O75175 753 aaKnown RBP8.16□□□□□ -1.1
PHGDH-219ENST00000641513 SEMA7AO75326 666 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 MT-CO3P00414 261 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 IGKV3-11P04433 115 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 DRD5P21918 477 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 PSMB9P28065 219 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 POU1F1P28069 291 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 OPRL1P41146 370 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 GSSP48637 474 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 ATP12AP54707 1039 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 DCAF7P61962 342 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 ST3GAL3Q11203 375 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 TCF15Q12870 199 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 OXA1LQ15070 435 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 SEC23BQ15437 767 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 ISXQ2M1V0 245 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 SDK2Q58EX2 2172 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 SLC25A30Q5SVS4 291 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 PAPD4Q6PIY7 484 aaKnown RBP8.16□□□□□ -1.1
PHGDH-219ENST00000641513 C19orf48Q6RUI8 117 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 DHRS13Q6UX07 377 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 CD300LDQ6UXZ3 194 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF730Q6ZMV8 503 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 USP43Q70EL4 1123 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 SLC46A3Q7Z3Q1 461 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 CPEB2Q7Z5Q1 589 aaKnown RBP8.16□□□□□ -1.1
PHGDH-219ENST00000641513 SLCO6A1Q86UG4 719 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 IGFN1Q86VF2 1251 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 C9orf40Q8IXQ3 194 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 MFSD4AQ8N468 514 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 TMCO5AQ8N6Q1 288 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 AMER2Q8N7J2 671 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 GATSQ8NAP1 163 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF527Q8NB42 609 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 CNOT9Q92600 299 aaKnown RBP8.16□□□□□ -1.1
PHGDH-219ENST00000641513 C8orf44Q96CB5 159 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 SLC41A3Q96GZ6 507 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 Q96MT0 163 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 DEPDC7Q96QD5 511 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 LMF1Q96S06 567 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 LPAR4Q99677 370 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 PRRX2Q99811 253 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 NIPSNAP1Q9BPW8 284 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 SLIRPQ9GZT3 109 aaKnown RBP8.16□□□□□ -1.1
PHGDH-219ENST00000641513 WWTR1Q9GZV5 400 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 HOXD1Q9GZZ0 328 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 AKIRIN1Q9H9L7 192 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-219ENST00000641513 TMEM27Q9HBJ8 222 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 PARD6AQ9NPB6 346 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 KCNE5Q9UJ90 142 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 NXT1Q9UKK6 140 aaKnown RBP8.16□□□□□ -1.1
PHGDH-219ENST00000641513 CHST2Q9Y4C5 530 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 UGT2A1Q9Y4X1 527 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 B3GALT1Q9Y5Z6 326 aa8.16□□□□□ -1.1
PHGDH-219ENST00000641513 TRBV11-1A0A0K0K1C0 115 aa8.15□□□□□ -1.1
PHGDH-219ENST00000641513 A0A1W2PRQ8 180 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms