RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 IL11P20809 199 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 LOXP28300 417 aaPredicted RBP13.06□□□□□ -0.32
SRRT-219ENST00000641476 SHC1P29353 583 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 SFTPDP35247 375 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 CCT3P49368 545 aaKnown RBP13.06□□□□□ -0.32
SRRT-219ENST00000641476 CTBP2P56545 445 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 KRT71Q3SY84 523 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 SPDYE7PQ495Y7 208 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.06□□□□□ -0.32
SRRT-219ENST00000641476 IL23RQ5VWK5 629 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 HBMQ6B0K9 141 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 ZNF527Q8NB42 609 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 OR5AK3PQ8NH89 298 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 PHOSPHO1Q8TCT1 267 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 TUBGCP3Q96CW5 907 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 KLHL4Q9C0H6 718 aa13.06□□□□□ -0.32
SRRT-219ENST00000641476 FAF1Q9UNN5 650 aaPredicted RBP13.06□□□□□ -0.32
SRRT-219ENST00000641476 ANK3Q12955 4377 aaKnown RBP13.05□□□□□ -0.32
SRRT-219ENST00000641476 TYROBPO43914 113 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 CNOT4O95628 575 aaKnown RBP13.05□□□□□ -0.32
SRRT-219ENST00000641476 KRT16P08779 473 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 PRPS1L1P21108 318 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 AGTR1P30556 359 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 SOAT1P35610 550 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 ETV4P43268 484 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 SUMO3P55854 103 aaPredicted RBP13.05□□□□□ -0.32
SRRT-219ENST00000641476 ZNF239Q16600 458 aaKnown RBP13.05□□□□□ -0.32
SRRT-219ENST00000641476 NDUFAF6Q330K2 333 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 CEP85LQ5SZL2 805 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 ANKRD34AQ69YU3 496 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 CBLN3Q6UW01 205 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 C22orf34Q6ZV56 151 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 MTERF4Q7Z6M4 381 aaKnown RBP13.05□□□□□ -0.32
SRRT-219ENST00000641476 RIMKLAQ8IXN7 391 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 NATD1Q8N6N6 113 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 ADAMTS15Q8TE58 950 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 RNF128Q8TEB7 428 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 MOAP1Q96BY2 351 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 COQ8BQ96D53 544 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 PKNOX2Q96KN3 472 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 BHLHE41Q9C0J9 482 aaPredicted RBP13.05□□□□□ -0.32
SRRT-219ENST00000641476 PLSCR4Q9NRQ2 329 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 KCNE3Q9Y6H6 103 aa13.05□□□□□ -0.32
SRRT-219ENST00000641476 NPIPB9F8W1W9 429 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 NUDT14O95848 222 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 THBDP07204 575 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 G6PDP11413 515 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 NID1P14543 1247 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 EIF1P41567 113 aaKnown RBP13.04□□□□□ -0.32
SRRT-219ENST00000641476 C21orf58P58505 322 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 RPS26P62854 115 aaKnown RBP13.04□□□□□ -0.32
SRRT-219ENST00000641476 HBA1P69905 142 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 LSM12Q3MHD2 195 aaKnown RBP13.04□□□□□ -0.32
SRRT-219ENST00000641476 KLHL26Q53HC5 615 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 PDSS1Q5T2R2 415 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 HMBOX1Q6NT76 420 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 STAC2Q6ZMT1 411 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 HDXQ7Z353 690 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 LILRA2Q8N149 483 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 ZNF614Q8N883 585 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 OR5D16Q8NGK9 328 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 ABHD3Q8WU67 409 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 OR7D2Q96RA2 312 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 PRPF18Q99633 342 aaKnown RBP13.04□□□□□ -0.32
SRRT-219ENST00000641476 DUSP26Q9BV47 211 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 SRXN1Q9BYN0 137 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 SERHL2Q9H4I8 314 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 COQ10BQ9H8M1 238 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 GLRX2Q9NS18 164 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 ICAM5Q9UMF0 924 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 CARD8Q9Y2G2 431 aa13.04□□□□□ -0.32
SRRT-219ENST00000641476 NUP214P35658 2090 aaPredicted RBP13.04□□□□□ -0.32
SRRT-219ENST00000641476 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.03□□□□□ -0.32
SRRT-219ENST00000641476 H3BNH8 94 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 CFLARO15519 480 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 PPP3CBP16298 524 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 FPR1P21462 350 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 P2RX1P51575 399 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 ATP12AP54707 1039 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 MAD2L1Q13257 205 aaPredicted RBP13.03□□□□□ -0.32
SRRT-219ENST00000641476 PDCD2Q16342 344 aaPredicted RBP13.03□□□□□ -0.32
SRRT-219ENST00000641476 ACKR1Q16570 336 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 C20orf204Q6ZNR8 217 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 CLECL1Q8IZS7 167 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 TMCO5AQ8N6Q1 288 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 FBXO27Q8NI29 283 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 PPP1R14CQ8TAE6 165 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 CPNE4Q96A23 557 aaPredicted RBP13.03□□□□□ -0.32
SRRT-219ENST00000641476 ACTR6Q9GZN1 396 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 HOXD1Q9GZZ0 328 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 ZNF446Q9NWS9 450 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 ASIC5Q9NY37 505 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
SRRT-219ENST00000641476 ACTL7BQ9Y614 415 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 GPC6Q9Y625 555 aaPredicted RBP13.03□□□□□ -0.32
SRRT-219ENST00000641476 HEATR5AQ86XA9 2040 aa13.03□□□□□ -0.32
SRRT-219ENST00000641476 DSCAMO60469 2012 aa13.02□□□□□ -0.33
SRRT-219ENST00000641476 RNF103-CHMP3A0A140T963 221 aa13.02□□□□□ -0.33
SRRT-219ENST00000641476 ITM2AO43736 263 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms