RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 GCKP35557 465 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 SUMO3P55854 103 aaPredicted RBP24.08■■□□□ 1.45
VEGFA-231ENST00000640499 KCNJ10P78508 379 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 FADDQ13158 208 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 SELPLGQ14242 412 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 RPS26P11Q5JNZ5 115 aaPredicted RBP24.08■■□□□ 1.45
VEGFA-231ENST00000640499 LIX1LQ8IVB5 337 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 NAXEQ8NCW5 288 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 OR5W2Q8NH69 310 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 ZBTB8AQ96BR9 441 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 SDCCAG3Q96C92 435 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 TREX2Q9BQ50 279 aaPredicted RBP24.08■■□□□ 1.45
VEGFA-231ENST00000640499 ELAC2Q9BQ52 826 aaKnown RBP24.08■■□□□ 1.45
VEGFA-231ENST00000640499 A4GALTQ9NPC4 353 aa24.08■■□□□ 1.45
VEGFA-231ENST00000640499 H3BML4 177 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 NTN1O95631 604 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 CSTAP01040 98 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 UBTFL6P0CB48 400 aaPredicted RBP24.07■■□□□ 1.44
VEGFA-231ENST00000640499 PEPDP12955 493 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 ZNF17P17021 662 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 GRNP28799 593 aaKnown RBP24.07■■□□□ 1.44
VEGFA-231ENST00000640499 CEACAM8P31997 349 aaPredicted RBP24.07■■□□□ 1.44
VEGFA-231ENST00000640499 HPCAP84074 193 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 FOXF1Q12946 379 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 ART3Q13508 389 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 ADRM1Q16186 407 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 EIF3MQ7L2H7 374 aaKnown RBP24.07■■□□□ 1.44
VEGFA-231ENST00000640499 DHDDSQ86SQ9 333 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 GGNQ86UU5 652 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 TNIP2Q8NFZ5 429 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 RNF145Q96MT1 663 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 ANKRD27Q96NW4 1050 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 TRIB1Q96RU8 372 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 THUMPD3Q9BV44 507 aaKnown RBP24.07■■□□□ 1.44
VEGFA-231ENST00000640499 CALHM2Q9HA72 323 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 ARMCX1Q9P291 453 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 CHST2Q9Y4C5 530 aa24.07■■□□□ 1.44
VEGFA-231ENST00000640499 CD8B2A6NJW9 211 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 H0Y3Z8 333 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 LINC01387J3KSC0 135 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 ETV2O00321 342 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-231ENST00000640499 ANGPT2O15123 496 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 PRKCAP17252 672 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 POU3F2P20265 443 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-231ENST00000640499 ZNF41P51814 821 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-231ENST00000640499 RIPPLY2Q5TAB7 128 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 POMZP3Q6PJE2 187 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 C9orf106Q8NAJ2 232 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 CNOT9Q92600 299 aaKnown RBP24.06■■□□□ 1.44
VEGFA-231ENST00000640499 PMM1Q92871 262 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 UCN2Q96RP3 112 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 CGREF1Q99674 301 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 RAD21L1Q9H4I0 556 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-231ENST00000640499 THUMPD1Q9NXG2 353 aaKnown RBP24.06■■□□□ 1.44
VEGFA-231ENST00000640499 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-231ENST00000640499 AP4B1Q9Y6B7 739 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 CACNA1CQ13936 2221 aa24.06■■□□□ 1.44
VEGFA-231ENST00000640499 DOCK7Q96N67 2140 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 CLCA1A8K7I4 914 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 CYP7B1O75881 506 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 CLDN14O95500 239 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 OPN1LWP04000 364 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 GP1BBP13224 206 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 TIMP3P35625 211 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 SLC25A53Q5H9E4 307 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 SPATA21Q7Z572 469 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 LSRQ86X29 649 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-231ENST00000640499 VRK2Q86Y07 508 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 LACC1Q8IV20 430 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 UBQLNLQ8IYU4 475 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 TOR1AIP2Q8NFQ8 470 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 LILRB4Q8NHJ6 448 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 FBXO27Q8NI29 283 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 UCK2Q9BZX2 261 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 BCL2L10Q9HD36 194 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 FAM53CQ9NYF3 392 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 CLCF1Q9UBD9 225 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 SLC35A3Q9Y2D2 325 aa24.05■■□□□ 1.44
VEGFA-231ENST00000640499 TNFSF12-TNFSF13A0A0A6YY99 330 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 GMNCA6NCL1 334 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 MBD3L4A6NDZ8 208 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-231ENST00000640499 MBD3L3A6NE82 208 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-231ENST00000640499 MBD3L5A6NJ08 208 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-231ENST00000640499 FXYD1O00168 92 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 ARAFP10398 606 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 PPIBP23284 216 aaKnown RBP24.04■■□□□ 1.44
VEGFA-231ENST00000640499 SHC1P29353 583 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 ADSLP30566 484 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-231ENST00000640499 CRISP3P54108 245 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 GNGT1P63211 74 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 NFYCQ13952 458 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 CAPRIN1Q14444 709 aaKnown RBP24.04■■□□□ 1.44
VEGFA-231ENST00000640499 QPRTQ15274 297 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 CTU2Q2VPK5 515 aaKnown RBP24.04■■□□□ 1.44
VEGFA-231ENST00000640499 SNX32Q86XE0 403 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 TMCO5AQ8N6Q1 288 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 OR10Q1Q8NGQ4 319 aa24.04■■□□□ 1.44
VEGFA-231ENST00000640499 MBD3L2Q8NHZ7 208 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-231ENST00000640499 ADGRG7Q96K78 797 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms